Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.14■■□□□ 1.29
COL1A2P08123 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.14■■□□□ 1.29
COL1A2P08123 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.14■■□□□ 1.29
COL1A2P08123 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL1A2P08123 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A2P08123 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A2P08123 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A2P08123 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A2P08123 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A2P08123 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.13■■□□□ 1.29
COL1A2P08123 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
COL1A2P08123 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.12■■□□□ 1.29
COL1A2P08123 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.12■■□□□ 1.29
COL1A2P08123 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
COL1A2P08123 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.12■■□□□ 1.29
COL1A2P08123 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.12■■□□□ 1.29
COL1A2P08123 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A2P08123 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.11■■□□□ 1.29
COL1A2P08123 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.11■■□□□ 1.29
COL1A2P08123 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
COL1A2P08123 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.11■■□□□ 1.29
COL1A2P08123 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL1A2P08123 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
COL1A2P08123 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.1■■□□□ 1.29
COL1A2P08123 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.1■■□□□ 1.29
COL1A2P08123 AC100791.3-201ENST00000617619 330 ntBASIC23.1■■□□□ 1.29
COL1A2P08123 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL1A2P08123 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.09■■□□□ 1.29
COL1A2P08123 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.09■■□□□ 1.29
COL1A2P08123 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.09■■□□□ 1.29
COL1A2P08123 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.09■■□□□ 1.29
COL1A2P08123 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.09■■□□□ 1.29
COL1A2P08123 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.09■■□□□ 1.29
COL1A2P08123 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.09■■□□□ 1.29
COL1A2P08123 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.09■■□□□ 1.29
COL1A2P08123 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
COL1A2P08123 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL1A2P08123 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.09■■□□□ 1.29
COL1A2P08123 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A2P08123 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A2P08123 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A2P08123 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.08■■□□□ 1.29
COL1A2P08123 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL1A2P08123 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.08■■□□□ 1.29
COL1A2P08123 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.08■■□□□ 1.29
COL1A2P08123 MYC-209ENST00000641252 345 ntBASIC23.08■■□□□ 1.29
COL1A2P08123 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL1A2P08123 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.08■■□□□ 1.28
COL1A2P08123 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
COL1A2P08123 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
COL1A2P08123 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL1A2P08123 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL1A2P08123 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A2P08123 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.07■■□□□ 1.28
COL1A2P08123 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.07■■□□□ 1.28
COL1A2P08123 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A2P08123 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.07■■□□□ 1.28
COL1A2P08123 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A2P08123 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.07■■□□□ 1.28
COL1A2P08123 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A2P08123 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.06■■□□□ 1.28
COL1A2P08123 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A2P08123 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms