Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 DIG1YPL049C 1359 nt8.13□□□□□ -1.11
VBA1Q04301 PAU16YKL224C 372 nt8.13□□□□□ -1.11
VBA1Q04301 YPS3YLR121C 1527 nt8.13□□□□□ -1.11
VBA1Q04301 YHR218WYHR218W 1812 nt8.13□□□□□ -1.11
VBA1Q04301 GID8YMR135C 1368 nt8.12□□□□□ -1.11
VBA1Q04301 YDL086WYDL086W 822 nt8.12□□□□□ -1.11
VBA1Q04301 COQ2YNR041C 1119 nt8.12□□□□□ -1.11
VBA1Q04301 CLB6YGR109C 1143 nt8.11□□□□□ -1.11
VBA1Q04301 NAT4YMR069W 858 nt8.11□□□□□ -1.11
VBA1Q04301 YMR103CYMR103C 363 nt8.11□□□□□ -1.11
VBA1Q04301 SSL2YIL143C 2532 nt8.11□□□□□ -1.11
VBA1Q04301 SBA1YKL117W 651 nt8.1□□□□□ -1.11
VBA1Q04301 MEP3YPR138C 1470 nt8.1□□□□□ -1.11
VBA1Q04301 NRT1YOR071C 1797 nt8.1□□□□□ -1.11
VBA1Q04301 MRS6YOR370C 1812 nt8.09□□□□□ -1.11
VBA1Q04301 SAM2YDR502C 1155 nt8.08□□□□□ -1.12
VBA1Q04301 UTH1YKR042W 1098 nt8.08□□□□□ -1.12
VBA1Q04301 FIT3YOR383C 615 nt8.08□□□□□ -1.12
VBA1Q04301 DLD2YDL178W 1593 nt8.07□□□□□ -1.12
VBA1Q04301 RPL4BYDR012W 1089 nt8.06□□□□□ -1.12
VBA1Q04301 RPL4AYBR031W 1089 nt8.06□□□□□ -1.12
VBA1Q04301 YKL133CYKL133C 1392 nt8.06□□□□□ -1.12
VBA1Q04301 MSF1YPR047W 1410 nt8.05□□□□□ -1.12
VBA1Q04301 OXA1YER154W 1209 nt8.04□□□□□ -1.12
VBA1Q04301 XYL2YLR070C 1071 nt8.04□□□□□ -1.12
VBA1Q04301 YHR219WYHR219W 1875 nt8.03□□□□□ -1.12
VBA1Q04301 UBX6YJL048C 1191 nt8.03□□□□□ -1.12
VBA1Q04301 MDM35YKL053C-A 261 nt8.03□□□□□ -1.12
VBA1Q04301 AIM45YPR004C 1035 nt8.03□□□□□ -1.12
VBA1Q04301 SEC61YLR378C 1443 nt8.03□□□□□ -1.12
VBA1Q04301 HEM13YDR044W 987 nt8.02□□□□□ -1.13
VBA1Q04301 NPP1YCR026C 2229 nt8.01□□□□□ -1.13
VBA1Q04301 YGL034CYGL034C 366 nt8.01□□□□□ -1.13
VBA1Q04301 HXT10YFL011W 1641 nt8□□□□□ -1.13
VBA1Q04301 CWP2YKL096W-A 279 nt8□□□□□ -1.13
VBA1Q04301 HXK1YFR053C 1458 nt8□□□□□ -1.13
VBA1Q04301 ALD5YER073W 1563 nt7.99□□□□□ -1.13
VBA1Q04301 RPS14BYJL191W 417 nt7.98□□□□□ -1.13
VBA1Q04301 YRF1-2YER190W 5046 nt7.97□□□□□ -1.13
VBA1Q04301 YER188WYER188W 720 nt7.95□□□□□ -1.14
VBA1Q04301 DLD3YEL071W 1491 nt7.94□□□□□ -1.14
VBA1Q04301 AIM1YAL046C 357 nt7.93□□□□□ -1.14
VBA1Q04301 PHO23YNL097C 993 nt7.93□□□□□ -1.14
VBA1Q04301 BNI5YNL166C 1347 nt7.93□□□□□ -1.14
VBA1Q04301 FUB1YCR076C 753 nt7.92□□□□□ -1.14
VBA1Q04301 PCP1YGR101W 1041 nt7.92□□□□□ -1.14
VBA1Q04301 LSR1LSR1 1175 nt7.92□□□□□ -1.14
VBA1Q04301 MSC1YML128C 1542 nt7.92□□□□□ -1.14
VBA1Q04301 AGP3YFL055W 1677 nt7.9□□□□□ -1.14
VBA1Q04301 OSH7YHR001W 1314 nt7.9□□□□□ -1.14
VBA1Q04301 RPD3YNL330C 1302 nt7.9□□□□□ -1.14
VBA1Q04301 TIM44YIL022W 1296 nt7.9□□□□□ -1.14
VBA1Q04301 RBG1YAL036C 1110 nt7.9□□□□□ -1.14
VBA1Q04301 YLR046CYLR046C 813 nt7.9□□□□□ -1.14
VBA1Q04301 TSC10YBR265W 963 nt7.9□□□□□ -1.14
VBA1Q04301 URA8YJR103W 1737 nt7.89□□□□□ -1.15
VBA1Q04301 TAT2YOL020W 1779 nt7.89□□□□□ -1.15
VBA1Q04301 YMR262WYMR262W 942 nt7.88□□□□□ -1.15
VBA1Q04301 YOR072WYOR072W 315 nt7.88□□□□□ -1.15
VBA1Q04301 NBA1YOL070C 1506 nt7.88□□□□□ -1.15
VBA1Q04301 ENT4YLL038C 744 nt7.87□□□□□ -1.15
VBA1Q04301 SDH5YOL071W 489 nt7.87□□□□□ -1.15
VBA1Q04301 GID7YCL039W 2238 nt7.87□□□□□ -1.15
VBA1Q04301 ITR2YOL103W 1830 nt7.85□□□□□ -1.15
VBA1Q04301 APT2YDR441C 546 nt7.84□□□□□ -1.15
VBA1Q04301 YLR279WYLR279W 390 nt7.84□□□□□ -1.15
VBA1Q04301 FCY21YER060W 1587 nt7.82□□□□□ -1.16
VBA1Q04301 VMA11YPL234C 495 nt7.82□□□□□ -1.16
VBA1Q04301 RIM2YBR192W 1134 nt7.82□□□□□ -1.16
VBA1Q04301 SOL2YCR073W-A 948 nt7.81□□□□□ -1.16
VBA1Q04301 ASP3-1YLR155C 1089 nt7.81□□□□□ -1.16
VBA1Q04301 ASP3-2YLR157C 1089 nt7.81□□□□□ -1.16
VBA1Q04301 ASP3-3YLR158C 1089 nt7.81□□□□□ -1.16
VBA1Q04301 ASP3-4YLR160C 1089 nt7.81□□□□□ -1.16
VBA1Q04301 RPC31YNL151C 756 nt7.81□□□□□ -1.16
VBA1Q04301 GPN2YOR262W 1044 nt7.81□□□□□ -1.16
VBA1Q04301 MSB4YOL112W 1479 nt7.81□□□□□ -1.16
VBA1Q04301 CSM1YCR086W 573 nt7.79□□□□□ -1.16
VBA1Q04301 YFL015W-AYFL015W-A 318 nt7.79□□□□□ -1.16
VBA1Q04301 YGR012WYGR012W 1182 nt7.79□□□□□ -1.16
VBA1Q04301 DPL1YDR294C 1770 nt7.79□□□□□ -1.16
VBA1Q04301 MEX67YPL169C 1800 nt7.78□□□□□ -1.16
VBA1Q04301 RAS2YNL098C 969 nt7.78□□□□□ -1.16
VBA1Q04301 YDR455CYDR455C 309 nt7.77□□□□□ -1.17
VBA1Q04301 NUC1YJL208C 990 nt7.77□□□□□ -1.17
VBA1Q04301 TIP1YBR067C 633 nt7.77□□□□□ -1.17
VBA1Q04301 ESBP6YNL125C 2022 nt7.77□□□□□ -1.17
VBA1Q04301 KRR1YCL059C 951 nt7.76□□□□□ -1.17
VBA1Q04301 INH1YDL181W 258 nt7.75□□□□□ -1.17
VBA1Q04301 SNX3YOR357C 489 nt7.75□□□□□ -1.17
VBA1Q04301 LEU4YNL104C 1860 nt7.75□□□□□ -1.17
VBA1Q04301 FET5YFL041W 1869 nt7.74□□□□□ -1.17
VBA1Q04301 SAM3YPL274W 1764 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)BtD(GUC)B 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)DtD(GUC)D 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)G1tD(GUC)G1 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)G2tD(GUC)G2 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)I1tD(GUC)I1 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)I2tD(GUC)I2 72 nt7.72□□□□□ -1.17
VBA1Q04301 tD(GUC)J1tD(GUC)J1 72 nt7.72□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms