Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 RTG2YGL252C 1767 nt8.3□□□□□ -1.08
SSN8P47821 YHR218WYHR218W 1812 nt8.3□□□□□ -1.08
SSN8P47821 UFD1YGR048W 1086 nt8.29□□□□□ -1.08
SSN8P47821 YAR028WYAR028W 705 nt8.29□□□□□ -1.08
SSN8P47821 RPS14BYJL191W 417 nt8.27□□□□□ -1.09
SSN8P47821 HXT1YHR094C 1713 nt8.26□□□□□ -1.09
SSN8P47821 GCD11YER025W 1584 nt8.26□□□□□ -1.09
SSN8P47821 DBP1YPL119C 1854 nt8.26□□□□□ -1.09
SSN8P47821 RSC8YFR037C 1674 nt8.25□□□□□ -1.09
SSN8P47821 FIT3YOR383C 615 nt8.25□□□□□ -1.09
SSN8P47821 LSB5YCL034W 1065 nt8.24□□□□□ -1.09
SSN8P47821 SED1YDR077W 1017 nt8.23□□□□□ -1.09
SSN8P47821 YOR325WYOR325W 474 nt8.23□□□□□ -1.09
SSN8P47821 ADE5,7YGL234W 2409 nt8.23□□□□□ -1.09
SSN8P47821 MTG2YHR168W 1557 nt8.22□□□□□ -1.09
SSN8P47821 DAK2YFL053W 1776 nt8.22□□□□□ -1.09
SSN8P47821 LIP1YMR298W 453 nt8.22□□□□□ -1.09
SSN8P47821 AKR2YOR034C 2250 nt8.2□□□□□ -1.1
SSN8P47821 ALP1YNL270C 1722 nt8.2□□□□□ -1.1
SSN8P47821 FIT1YDR534C 1587 nt8.19□□□□□ -1.1
SSN8P47821 YER190C-AYER190C-A 576 nt8.19□□□□□ -1.1
SSN8P47821 YGR296C-AYGR296C-A 576 nt8.19□□□□□ -1.1
SSN8P47821 YML133W-AYML133W-A 576 nt8.19□□□□□ -1.1
SSN8P47821 YNL339W-AYNL339W-A 576 nt8.19□□□□□ -1.1
SSN8P47821 YPL283W-AYPL283W-A 576 nt8.19□□□□□ -1.1
SSN8P47821 ECM10YEL030W 1935 nt8.19□□□□□ -1.1
SSN8P47821 ZTA1YBR046C 1005 nt8.18□□□□□ -1.1
SSN8P47821 YBL086CYBL086C 1401 nt8.18□□□□□ -1.1
SSN8P47821 SHY1YGR112W 1170 nt8.17□□□□□ -1.1
SSN8P47821 TSC10YBR265W 963 nt8.17□□□□□ -1.1
SSN8P47821 SGA1YIL099W 1650 nt8.16□□□□□ -1.1
SSN8P47821 YIL100C-AYIL100C-A 339 nt8.16□□□□□ -1.1
SSN8P47821 OPI10YOL032W 741 nt8.16□□□□□ -1.1
SSN8P47821 ARO8YGL202W 1503 nt8.15□□□□□ -1.1
SSN8P47821 SAM1YLR180W 1149 nt8.14□□□□□ -1.11
SSN8P47821 SDH5YOL071W 489 nt8.14□□□□□ -1.11
SSN8P47821 KES1YPL145C 1305 nt8.12□□□□□ -1.11
SSN8P47821 LEU9YOR108W 1815 nt8.12□□□□□ -1.11
SSN8P47821 YRF1-2YER190W 5046 nt8.12□□□□□ -1.11
SSN8P47821 ZAP1YJL056C 2643 nt8.1□□□□□ -1.11
SSN8P47821 MET30YIL046W 1923 nt8.1□□□□□ -1.11
SSN8P47821 URA6YKL024C 615 nt8.1□□□□□ -1.11
SSN8P47821 TOA2YKL058W 369 nt8.1□□□□□ -1.11
SSN8P47821 YLR279WYLR279W 390 nt8.1□□□□□ -1.11
SSN8P47821 BRR1YPR057W 1026 nt8.1□□□□□ -1.11
SSN8P47821 YGR012WYGR012W 1182 nt8.09□□□□□ -1.11
SSN8P47821 YPL251WYPL251W 303 nt8.09□□□□□ -1.11
SSN8P47821 MCM5YLR274W 2328 nt8.08□□□□□ -1.12
SSN8P47821 YNL190WYNL190W 615 nt8.08□□□□□ -1.12
SSN8P47821 GLR1YPL091W 1452 nt8.07□□□□□ -1.12
SSN8P47821 UFO1YML088W 2007 nt8.07□□□□□ -1.12
SSN8P47821 ADE2YOR128C 1716 nt8.07□□□□□ -1.12
SSN8P47821 SBA1YKL117W 651 nt8.07□□□□□ -1.12
SSN8P47821 CCT2YIL142W 1584 nt8.06□□□□□ -1.12
SSN8P47821 MAM3YOL060C 2121 nt8.06□□□□□ -1.12
SSN8P47821 MSB4YOL112W 1479 nt8.05□□□□□ -1.12
SSN8P47821 LAS17YOR181W 1902 nt8.05□□□□□ -1.12
SSN8P47821 RAD23YEL037C 1197 nt8.04□□□□□ -1.12
SSN8P47821 ODC1YPL134C 933 nt8.04□□□□□ -1.12
SSN8P47821 SNU66YOR308C 1764 nt8.03□□□□□ -1.12
SSN8P47821 GND2YGR256W 1479 nt8.03□□□□□ -1.12
SSN8P47821 TRT2tT(CGU)K 72 nt8.03□□□□□ -1.12
SSN8P47821 OYE3YPL171C 1203 nt8.03□□□□□ -1.12
SSN8P47821 PMA2YPL036W 2844 nt8.03□□□□□ -1.12
SSN8P47821 LSB6YJL100W 1824 nt8.03□□□□□ -1.12
SSN8P47821 QDR2YIL121W 1629 nt8.03□□□□□ -1.12
SSN8P47821 NBA1YOL070C 1506 nt8.03□□□□□ -1.12
SSN8P47821 YLR111WYLR111W 333 nt8.02□□□□□ -1.13
SSN8P47821 YMR103CYMR103C 363 nt8.02□□□□□ -1.13
SSN8P47821 PET8YNL003C 855 nt8.02□□□□□ -1.13
SSN8P47821 CWC15YDR163W 528 nt8□□□□□ -1.13
SSN8P47821 BET2YPR176C 978 nt8□□□□□ -1.13
SSN8P47821 HXT10YFL011W 1641 nt8□□□□□ -1.13
SSN8P47821 NDE1YMR145C 1683 nt7.99□□□□□ -1.13
SSN8P47821 FRT1YOR324C 1809 nt7.99□□□□□ -1.13
SSN8P47821 APT2YDR441C 546 nt7.99□□□□□ -1.13
SSN8P47821 YPL222C-AYPL222C-A 246 nt7.99□□□□□ -1.13
SSN8P47821 SAM2YDR502C 1155 nt7.98□□□□□ -1.13
SSN8P47821 YMR226CYMR226C 804 nt7.97□□□□□ -1.13
SSN8P47821 YMR244WYMR244W 1068 nt7.97□□□□□ -1.13
SSN8P47821 FCY21YER060W 1587 nt7.97□□□□□ -1.13
SSN8P47821 RIB3YDR487C 627 nt7.95□□□□□ -1.14
SSN8P47821 MIM1YOL026C 342 nt7.95□□□□□ -1.14
SSN8P47821 CCR4YAL021C 2514 nt7.95□□□□□ -1.14
SSN8P47821 SEC61YLR378C 1443 nt7.95□□□□□ -1.14
SSN8P47821 GND1YHR183W 1470 nt7.93□□□□□ -1.14
SSN8P47821 DUS3YLR401C 2007 nt7.92□□□□□ -1.14
SSN8P47821 OXA1YER154W 1209 nt7.92□□□□□ -1.14
SSN8P47821 CAB5YDR196C 726 nt7.91□□□□□ -1.14
SSN8P47821 BEM1YBR200W 1656 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)BtD(GUC)B 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)DtD(GUC)D 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)G1tD(GUC)G1 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)G2tD(GUC)G2 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)I1tD(GUC)I1 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)I2tD(GUC)I2 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)J1tD(GUC)J1 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)J2tD(GUC)J2 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)J3tD(GUC)J3 72 nt7.9□□□□□ -1.14
SSN8P47821 tD(GUC)J4tD(GUC)J4 72 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 53.3 ms