Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 RET2YFR051C 1641 nt7.37□□□□□ -1.23
CDC40P40968 RTG2YGL252C 1767 nt7.36□□□□□ -1.23
CDC40P40968 PAU7YAR020C 168 nt7.36□□□□□ -1.23
CDC40P40968 ACH1YBL015W 1581 nt7.36□□□□□ -1.23
CDC40P40968 DUR3YHL016C 2208 nt7.35□□□□□ -1.23
CDC40P40968 ATG15YCR068W 1563 nt7.35□□□□□ -1.23
CDC40P40968 LIP1YMR298W 453 nt7.34□□□□□ -1.23
CDC40P40968 YKL133CYKL133C 1392 nt7.33□□□□□ -1.24
CDC40P40968 POM34YLR018C 900 nt7.33□□□□□ -1.24
CDC40P40968 ALR1YOL130W 2580 nt7.33□□□□□ -1.24
CDC40P40968 DIG1YPL049C 1359 nt7.33□□□□□ -1.24
CDC40P40968 YFL015W-AYFL015W-A 318 nt7.32□□□□□ -1.24
CDC40P40968 SHB17YKR043C 816 nt7.32□□□□□ -1.24
CDC40P40968 SPP2YOR148C 558 nt7.32□□□□□ -1.24
CDC40P40968 OYE3YPL171C 1203 nt7.32□□□□□ -1.24
CDC40P40968 SBA1YKL117W 651 nt7.31□□□□□ -1.24
CDC40P40968 PAU16YKL224C 372 nt7.31□□□□□ -1.24
CDC40P40968 PET8YNL003C 855 nt7.31□□□□□ -1.24
CDC40P40968 PHO23YNL097C 993 nt7.31□□□□□ -1.24
CDC40P40968 PRE6YOL038W 765 nt7.31□□□□□ -1.24
CDC40P40968 NBA1YOL070C 1506 nt7.31□□□□□ -1.24
CDC40P40968 ADE2YOR128C 1716 nt7.3□□□□□ -1.24
CDC40P40968 YER190C-AYER190C-A 576 nt7.3□□□□□ -1.24
CDC40P40968 YGR296C-AYGR296C-A 576 nt7.3□□□□□ -1.24
CDC40P40968 YML133W-AYML133W-A 576 nt7.3□□□□□ -1.24
CDC40P40968 YNL339W-AYNL339W-A 576 nt7.3□□□□□ -1.24
CDC40P40968 YPL283W-AYPL283W-A 576 nt7.3□□□□□ -1.24
CDC40P40968 FMS1YMR020W 1527 nt7.29□□□□□ -1.24
CDC40P40968 TPN1YGL186C 1740 nt7.28□□□□□ -1.24
CDC40P40968 SED1YDR077W 1017 nt7.28□□□□□ -1.24
CDC40P40968 YMR244WYMR244W 1068 nt7.28□□□□□ -1.24
CDC40P40968 SAM1YLR180W 1149 nt7.27□□□□□ -1.25
CDC40P40968 AGP3YFL055W 1677 nt7.27□□□□□ -1.25
CDC40P40968 YHR219WYHR219W 1875 nt7.27□□□□□ -1.25
CDC40P40968 LEU9YOR108W 1815 nt7.27□□□□□ -1.25
CDC40P40968 VPS62YGR141W 1404 nt7.27□□□□□ -1.25
CDC40P40968 GCD11YER025W 1584 nt7.26□□□□□ -1.25
CDC40P40968 YDR010CYDR010C 333 nt7.26□□□□□ -1.25
CDC40P40968 YDL086WYDL086W 822 nt7.25□□□□□ -1.25
CDC40P40968 CWP2YKL096W-A 279 nt7.25□□□□□ -1.25
CDC40P40968 NAT4YMR069W 858 nt7.25□□□□□ -1.25
CDC40P40968 THI6YPL214C 1623 nt7.25□□□□□ -1.25
CDC40P40968 TOA2YKL058W 369 nt7.24□□□□□ -1.25
CDC40P40968 YML089CYML089C 369 nt7.24□□□□□ -1.25
CDC40P40968 MIR1YJR077C 936 nt7.23□□□□□ -1.25
CDC40P40968 MAM3YOL060C 2121 nt7.23□□□□□ -1.25
CDC40P40968 DAK2YFL053W 1776 nt7.23□□□□□ -1.25
CDC40P40968 ECM27YJR106W 2178 nt7.22□□□□□ -1.25
CDC40P40968 BRR1YPR057W 1026 nt7.22□□□□□ -1.25
CDC40P40968 SFA1YDL168W 1161 nt7.21□□□□□ -1.26
CDC40P40968 UFD1YGR048W 1086 nt7.21□□□□□ -1.26
CDC40P40968 LSR1LSR1 1175 nt7.21□□□□□ -1.26
CDC40P40968 MIM1YOL026C 342 nt7.21□□□□□ -1.26
CDC40P40968 YPL251WYPL251W 303 nt7.21□□□□□ -1.26
CDC40P40968 GND2YGR256W 1479 nt7.21□□□□□ -1.26
CDC40P40968 YPS3YLR121C 1527 nt7.21□□□□□ -1.26
CDC40P40968 FLR1YBR008C 1647 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)BtD(GUC)B 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)DtD(GUC)D 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)G1tD(GUC)G1 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)G2tD(GUC)G2 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)I1tD(GUC)I1 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)I2tD(GUC)I2 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)J1tD(GUC)J1 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)J2tD(GUC)J2 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)J3tD(GUC)J3 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)J4tD(GUC)J4 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)KtD(GUC)K 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)L1tD(GUC)L1 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)L2tD(GUC)L2 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)MtD(GUC)M 72 nt7.2□□□□□ -1.26
CDC40P40968 tD(GUC)OtD(GUC)O 72 nt7.2□□□□□ -1.26
CDC40P40968 YHL019W-AYHL019W-A 594 nt7.2□□□□□ -1.26
CDC40P40968 UBA4YHR111W 1323 nt7.2□□□□□ -1.26
CDC40P40968 TRT2tT(CGU)K 72 nt7.19□□□□□ -1.26
CDC40P40968 YAR028WYAR028W 705 nt7.19□□□□□ -1.26
CDC40P40968 THI74YDR438W 1113 nt7.18□□□□□ -1.26
CDC40P40968 TIM44YIL022W 1296 nt7.18□□□□□ -1.26
CDC40P40968 TOM6YOR045W 186 nt7.18□□□□□ -1.26
CDC40P40968 LSB5YCL034W 1065 nt7.18□□□□□ -1.26
CDC40P40968 YHR131CYHR131C 2553 nt7.18□□□□□ -1.26
CDC40P40968 PHO89YBR296C 1725 nt7.18□□□□□ -1.26
CDC40P40968 MSF1YPR047W 1410 nt7.18□□□□□ -1.26
CDC40P40968 FIT1YDR534C 1587 nt7.17□□□□□ -1.26
CDC40P40968 RBG1YAL036C 1110 nt7.17□□□□□ -1.26
CDC40P40968 ADE5,7YGL234W 2409 nt7.16□□□□□ -1.26
CDC40P40968 LPD1YFL018C 1500 nt7.16□□□□□ -1.26
CDC40P40968 YMR262WYMR262W 942 nt7.15□□□□□ -1.26
CDC40P40968 YEL023CYEL023C 2049 nt7.15□□□□□ -1.27
CDC40P40968 MTG2YHR168W 1557 nt7.14□□□□□ -1.27
CDC40P40968 YSR3YKR053C 1215 nt7.14□□□□□ -1.27
CDC40P40968 HBS1YKR084C 1836 nt7.14□□□□□ -1.27
CDC40P40968 RPD3YNL330C 1302 nt7.14□□□□□ -1.27
CDC40P40968 TIF6YPR016C 738 nt7.14□□□□□ -1.27
CDC40P40968 AAC3YBR085W 924 nt7.14□□□□□ -1.27
CDC40P40968 FET5YFL041W 1869 nt7.13□□□□□ -1.27
CDC40P40968 DLD3YEL071W 1491 nt7.13□□□□□ -1.27
CDC40P40968 YCR087WYCR087W 516 nt7.13□□□□□ -1.27
CDC40P40968 YJL045WYJL045W 1905 nt7.13□□□□□ -1.27
CDC40P40968 YRF1-2YER190W 5046 nt7.12□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms