Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.96■□□□□ 0.63
ZNF407Q9C0G0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF407Q9C0G0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF407Q9C0G0 KRT18P6-201ENST00000555540 1265 ntBASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 AC092053.2-201ENST00000640557 1818 ntBASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF407Q9C0G0 AC083880.1-201ENST00000608266 535 ntBASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF407Q9C0G0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF407Q9C0G0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF407Q9C0G0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF407Q9C0G0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF407Q9C0G0 TSPY20P-201ENST00000450910 630 ntBASIC18.9■□□□□ 0.62
ZNF407Q9C0G0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms