Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 AC012414.1-201ENST00000556676 535 ntBASIC21.84■■□□□ 1.09
RFX6Q8HWS3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.84■■□□□ 1.09
RFX6Q8HWS3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RFX6Q8HWS3 AC005837.3-201ENST00000612163 286 ntBASIC21.83■■□□□ 1.09
RFX6Q8HWS3 AL049796.1-201ENST00000565336 1766 ntBASIC21.83■■□□□ 1.09
RFX6Q8HWS3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX6Q8HWS3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.82■■□□□ 1.08
RFX6Q8HWS3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 AL354811.1-201ENST00000610286 706 ntBASIC21.81■■□□□ 1.08
RFX6Q8HWS3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX6Q8HWS3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.8■■□□□ 1.08
RFX6Q8HWS3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 MIR6084-201ENST00000622012 110 ntBASIC21.8■■□□□ 1.08
RFX6Q8HWS3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX6Q8HWS3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RFX6Q8HWS3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 AC105265.2-201ENST00000467189 838 ntBASIC21.78■■□□□ 1.08
RFX6Q8HWS3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 AL358852.1-201ENST00000623174 1268 ntBASIC21.78■■□□□ 1.08
RFX6Q8HWS3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RFX6Q8HWS3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RFX6Q8HWS3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms