Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NIPAL1Q6NVV3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L2-201ENST00000561772 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L6-201ENST00000626483 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L1-201ENST00000627662 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L8-201ENST00000629013 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L3-201ENST00000630187 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L7-201ENST00000630678 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 DUX4L5-201ENST00000630834 1275 ntBASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NIPAL1Q6NVV3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NIPAL1Q6NVV3 AL391422.3-201ENST00000603791 2761 ntBASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NIPAL1Q6NVV3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 FAM99A-202ENST00000538190 1989 ntBASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 AC104564.3-201ENST00000582367 638 ntBASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NIPAL1Q6NVV3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 KRT19P1-201ENST00000405746 1186 ntBASIC20.15■□□□□ 0.82
NIPAL1Q6NVV3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms