Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ERP1YAR002C-A 660 nt3.88□□□□□ -1.79
SSM4P40318 YPP1YGR198W 2454 nt3.88□□□□□ -1.79
SSM4P40318 MIG1YGL035C 1515 nt3.87□□□□□ -1.79
SSM4P40318 YDR149CYDR149C 708 nt3.87□□□□□ -1.79
SSM4P40318 YEL057CYEL057C 702 nt3.87□□□□□ -1.79
SSM4P40318 SPO11YHL022C 1197 nt3.87□□□□□ -1.79
SSM4P40318 YAL031W-AYAL031W-A 309 nt3.87□□□□□ -1.79
SSM4P40318 REH1YLR387C 1299 nt3.87□□□□□ -1.79
SSM4P40318 BET5YML077W 480 nt3.87□□□□□ -1.79
SSM4P40318 ITT1YML068W 1395 nt3.86□□□□□ -1.79
SSM4P40318 TVP15YDR100W 432 nt3.86□□□□□ -1.79
SSM4P40318 YDR320W-BYDR320W-B 138 nt3.86□□□□□ -1.79
SSM4P40318 FRQ1YDR373W 573 nt3.86□□□□□ -1.79
SSM4P40318 MIG2YGL209W 1149 nt3.86□□□□□ -1.79
SSM4P40318 QCR10YHR001W-A 234 nt3.86□□□□□ -1.79
SSM4P40318 PEX18YHR160C 852 nt3.86□□□□□ -1.79
SSM4P40318 YHR182C-AYHR182C-A 474 nt3.86□□□□□ -1.79
SSM4P40318 YKR033CYKR033C 426 nt3.86□□□□□ -1.79
SSM4P40318 YLL037WYLL037W 381 nt3.86□□□□□ -1.79
SSM4P40318 RPS30AYLR287C-A 192 nt3.86□□□□□ -1.79
SSM4P40318 YBL028CYBL028C 321 nt3.86□□□□□ -1.79
SSM4P40318 ATG3YNR007C 933 nt3.86□□□□□ -1.79
SSM4P40318 YPL135C-AYPL135C-A 174 nt3.86□□□□□ -1.79
SSM4P40318 POL30YBR088C 777 nt3.86□□□□□ -1.79
SSM4P40318 STP1YDR463W 1560 nt3.86□□□□□ -1.79
SSM4P40318 YHR078WYHR078W 1659 nt3.85□□□□□ -1.79
SSM4P40318 YCR045W-AYCR045W-A 351 nt3.85□□□□□ -1.79
SSM4P40318 GPI14YJR013W 1212 nt3.85□□□□□ -1.79
SSM4P40318 NNF1YJR112W 606 nt3.85□□□□□ -1.79
SSM4P40318 ENP2YGR145W 2124 nt3.85□□□□□ -1.79
SSM4P40318 YEL032C-AYEL032C-A 162 nt3.84□□□□□ -1.79
SSM4P40318 IKI1YHR187W 930 nt3.84□□□□□ -1.79
SSM4P40318 YJL156W-AYJL156W-A 222 nt3.84□□□□□ -1.79
SSM4P40318 YKL065W-AYKL065W-A 222 nt3.84□□□□□ -1.79
SSM4P40318 RPL23AYBL087C 414 nt3.84□□□□□ -1.79
SSM4P40318 YNR062CYNR062C 984 nt3.84□□□□□ -1.79
SSM4P40318 YOR203WYOR203W 354 nt3.84□□□□□ -1.79
SSM4P40318 RFC5YBR087W 1065 nt3.84□□□□□ -1.79
SSM4P40318 HDA2YDR295C 2025 nt3.84□□□□□ -1.8
SSM4P40318 YJL132WYJL132W 2253 nt3.83□□□□□ -1.8
SSM4P40318 COG7YGL005C 840 nt3.83□□□□□ -1.8
SSM4P40318 YHR032W-AYHR032W-A 180 nt3.83□□□□□ -1.8
SSM4P40318 COX2Q0250 756 nt3.83□□□□□ -1.8
SSM4P40318 URA5YML106W 681 nt3.83□□□□□ -1.8
SSM4P40318 YDR261W-AYDR261W-A 1317 nt3.82□□□□□ -1.8
SSM4P40318 PDR1YGL013C 3207 nt3.82□□□□□ -1.8
SSM4P40318 RTT10YPL183C 3042 nt3.82□□□□□ -1.8
SSM4P40318 YFL012WYFL012W 447 nt3.82□□□□□ -1.8
SSM4P40318 MST27YGL051W 705 nt3.82□□□□□ -1.8
SSM4P40318 CTK2YJL006C 972 nt3.82□□□□□ -1.8
SSM4P40318 YBL055CYBL055C 1257 nt3.82□□□□□ -1.8
SSM4P40318 CIN2YPL241C 807 nt3.82□□□□□ -1.8
SSM4P40318 ATP20YPR020W 348 nt3.82□□□□□ -1.8
SSM4P40318 DUN1YDL101C 1542 nt3.81□□□□□ -1.8
SSM4P40318 SYT1YPR095C 3681 nt3.81□□□□□ -1.8
SSM4P40318 FAR1YJL157C 2493 nt3.81□□□□□ -1.8
SSM4P40318 ATC1YDR184C 885 nt3.81□□□□□ -1.8
SSM4P40318 MFA1YDR461W 111 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)G1tW(CCA)G1 72 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)G2tW(CCA)G2 72 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)JtW(CCA)J 72 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)KtW(CCA)K 72 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)MtW(CCA)M 72 nt3.81□□□□□ -1.8
SSM4P40318 tW(CCA)PtW(CCA)P 72 nt3.81□□□□□ -1.8
SSM4P40318 GPX1YKL026C 504 nt3.81□□□□□ -1.8
SSM4P40318 MCA1YOR197W 1299 nt3.81□□□□□ -1.8
SSM4P40318 NAB3YPL190C 2409 nt3.81□□□□□ -1.8
SSM4P40318 INO80YGL150C 4470 nt3.81□□□□□ -1.8
SSM4P40318 PHO81YGR233C 3537 nt3.8□□□□□ -1.8
SSM4P40318 SSE2YBR169C 2082 nt3.8□□□□□ -1.8
SSM4P40318 ERP3YDL018C 678 nt3.8□□□□□ -1.8
SSM4P40318 COBQ0105 1158 nt3.8□□□□□ -1.8
SSM4P40318 GTR2YGR163W 1026 nt3.8□□□□□ -1.8
SSM4P40318 PCD1YLR151C 1023 nt3.8□□□□□ -1.8
SSM4P40318 YPT6YLR262C 648 nt3.8□□□□□ -1.8
SSM4P40318 BUB1YGR188C 3066 nt3.79□□□□□ -1.8
SSM4P40318 TOP1YOL006C 2310 nt3.79□□□□□ -1.8
SSM4P40318 RIM1YCR028C-A 408 nt3.79□□□□□ -1.8
SSM4P40318 snR83snR83 306 nt3.79□□□□□ -1.8
SSM4P40318 HTA1YDR225W 399 nt3.79□□□□□ -1.8
SSM4P40318 GRX2YDR513W 432 nt3.79□□□□□ -1.8
SSM4P40318 RPL1BYGL135W 654 nt3.79□□□□□ -1.8
SSM4P40318 UPF3YGR072W 1164 nt3.79□□□□□ -1.8
SSM4P40318 NNT1YLR285W 786 nt3.79□□□□□ -1.8
SSM4P40318 YNL276CYNL276C 396 nt3.79□□□□□ -1.8
SSM4P40318 snR17asnR17a 333 nt3.79□□□□□ -1.8
SSM4P40318 RPL1AYPL220W 654 nt3.79□□□□□ -1.8
SSM4P40318 MED8YBR193C 672 nt3.79□□□□□ -1.8
SSM4P40318 STP2YHR006W 1626 nt3.79□□□□□ -1.8
SSM4P40318 ESA1YOR244W 1338 nt3.79□□□□□ -1.8
SSM4P40318 ARG2YJL071W 1725 nt3.78□□□□□ -1.8
SSM4P40318 PIG2YIL045W 1617 nt3.78□□□□□ -1.8
SSM4P40318 MAM1YER106W 909 nt3.78□□□□□ -1.8
SSM4P40318 SEC4YFL005W 648 nt3.78□□□□□ -1.8
SSM4P40318 NDL1YLR254C 570 nt3.78□□□□□ -1.8
SSM4P40318 KAR4YCL055W 1008 nt3.78□□□□□ -1.8
SSM4P40318 PTP3YER075C 2787 nt3.78□□□□□ -1.8
SSM4P40318 GIN4YDR507C 3429 nt3.78□□□□□ -1.8
SSM4P40318 REB1YBR049C 2433 nt3.77□□□□□ -1.81
SSM4P40318 APC5YOR249C 2058 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms