Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 EMC2YJR088C 879 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 UTP11YKL099C 753 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 KTR2YKR061W 1278 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 PKR1YMR123W 369 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 YMR304C-AYMR304C-A 351 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 CHA4YLR098C 1947 nt4.4□□□□□ -1.71
TY1A-ER1P0CX71 PPZ1YML016C 2079 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 GNT1YOR320C 1476 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 SNT2YGL131C 4212 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 MRPL11YDL202W 750 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 MIC19YFR011C 513 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 MRPL31YKL138C 396 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 YOR225WYOR225W 330 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 RPL21BYPL079W 483 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 ROX1YPR065W 1107 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 GDB1YPR184W 4611 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 KAR2YJL034W 2049 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 YNR063WYNR063W 1824 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 SBE2YDR351W 2595 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 HXT14YNL318C 1623 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 ULP1YPL020C 1866 nt4.39□□□□□ -1.71
TY1A-ER1P0CX71 NDC1YML031W 1968 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 EPO1YMR124W 2832 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 ISW2YOR304W 3363 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 RPP1AYDL081C 321 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 YDR015CYDR015C 240 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 PDX1YGR193C 1233 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 MIM2YLR099W-A 264 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 YML009C-AYML009C-A 327 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 ATX1YNL259C 222 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 RPS19BYNL302C 435 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 YOR121CYOR121C 306 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 RIM13YMR154C 2184 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 TUB3YML124C 1338 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 ROK1YGL171W 1695 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 YDR261C-DYDR261C-D 4815 nt4.38□□□□□ -1.71
TY1A-ER1P0CX71 SFI1YLL003W 2841 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 BRE5YNR051C 1548 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 snR65snR65 100 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 OPI6YDL096C 327 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RPL34AYER056C-A 366 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 SLX8YER116C 825 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 ECO1YFR027W 846 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RPL11BYGR085C 525 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 YHR052W-AYHR052W-A 195 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 YHR054W-AYHR054W-A 195 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RPS5YJR123W 678 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 YAL037WYAL037W 804 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RMP1YLR145W 606 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 SAP30YMR263W 606 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 YBR016WYBR016W 387 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 IRC16YPR038W 360 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RPL11AYPR102C 525 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RAD16YBR114W 2373 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 VPS9YML097C 1356 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 STI1YOR027W 1770 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 PXA1YPL147W 2613 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 DSF2YBR007C 2211 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 SPE1YKL184W 1401 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 RAD52YML032C 1416 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 BFR1YOR198C 1413 nt4.37□□□□□ -1.71
TY1A-ER1P0CX71 YRR1YOR162C 2433 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 MNR2YKL064W 2910 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 SSE2YBR169C 2082 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 OAF3YKR064W 2592 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 SHE10YGL228W 1734 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YIL141WYIL141W 390 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 RPA12YJR063W 378 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YLR076CYLR076C 423 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 PNP1YLR209C 936 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 COX8YLR395C 237 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 RPL6BYLR448W 531 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YNL337WYNL337W 255 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YOR277CYOR277C 309 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 ILV6YCL009C 930 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YJR098CYJR098C 1971 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YOR1YGR281W 4434 nt4.36□□□□□ -1.71
TY1A-ER1P0CX71 YJL132WYJL132W 2253 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 EXO70YJL085W 1872 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 AHC2YCR082W 387 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 YDL009CYDL009C 324 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 NOP6YDL213C 678 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 YDR431WYDR431W 312 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 YER137W-AYER137W-A 306 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 MET31YPL038W 534 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 UBC4YBR082C 447 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 FRM2YCL026C-A 582 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 HOT1YMR172W 2160 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 SWT1YOR166C 1377 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 ROT2YBR229C 2865 nt4.35□□□□□ -1.71
TY1A-ER1P0CX71 YGR266WYGR266W 2106 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 SRD1YCR018C 666 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YDR090CYDR090C 933 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YDR413CYDR413C 576 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YHL018WYHL018W 363 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 PAM18YLR008C 507 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YNL146C-AYNL146C-A 195 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 CDC33YOL139C 642 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YPR039WYPR039W 336 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 PRR1YKL116C 1557 nt4.34□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 49.8 ms