Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
UPK1BO75841 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.38■□□□□ 0.53
UPK1BO75841 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.38■□□□□ 0.53
UPK1BO75841 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
UPK1BO75841 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
UPK1BO75841 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.37■□□□□ 0.53
UPK1BO75841 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.37■□□□□ 0.53
UPK1BO75841 AC007029.1-201ENST00000604183 313 ntBASIC18.37■□□□□ 0.53
UPK1BO75841 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
UPK1BO75841 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UPK1BO75841 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.37■□□□□ 0.53
UPK1BO75841 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
UPK1BO75841 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
UPK1BO75841 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
UPK1BO75841 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UPK1BO75841 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.35■□□□□ 0.53
UPK1BO75841 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
UPK1BO75841 AC099778.1-201ENST00000568593 1911 ntBASIC18.35■□□□□ 0.53
UPK1BO75841 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.35■□□□□ 0.53
UPK1BO75841 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.35■□□□□ 0.53
UPK1BO75841 AC005082.1-201ENST00000413042 2259 ntBASIC18.35■□□□□ 0.53
UPK1BO75841 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UPK1BO75841 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UPK1BO75841 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UPK1BO75841 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UPK1BO75841 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.34■□□□□ 0.53
UPK1BO75841 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.34■□□□□ 0.53
UPK1BO75841 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 FP325331.1-202ENST00000623531 1380 ntBASIC18.34■□□□□ 0.53
UPK1BO75841 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1BO75841 AL512408.1-201ENST00000569378 2000 ntBASIC18.34■□□□□ 0.53
UPK1BO75841 NEFHP1-201ENST00000412845 2629 ntBASIC18.34■□□□□ 0.53
UPK1BO75841 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.34■□□□□ 0.53
UPK1BO75841 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.34■□□□□ 0.53
UPK1BO75841 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UPK1BO75841 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.34■□□□□ 0.53
UPK1BO75841 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UPK1BO75841 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
UPK1BO75841 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UPK1BO75841 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.33■□□□□ 0.52
UPK1BO75841 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.33■□□□□ 0.52
UPK1BO75841 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
UPK1BO75841 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.33■□□□□ 0.52
UPK1BO75841 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
UPK1BO75841 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPK1BO75841 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
UPK1BO75841 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UPK1BO75841 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms