Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 AL050303.2-201ENST00000619798 666 ntBASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SNAP47Q5SQN1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 AL121832.2-201ENST00000610979 668 ntBASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 C1orf229-201ENST00000623686 2258 ntBASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNAP47Q5SQN1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 AC083906.2-201ENST00000511578 360 ntBASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 KRT18P20-201ENST00000548986 1279 ntBASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 EEF1DP3-203ENST00000566025 782 ntBASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 AC010536.3-201ENST00000620306 533 ntBASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.42■□□□□ 0.86
SNAP47Q5SQN1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 AC053503.5-201ENST00000601508 636 ntBASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SNAP47Q5SQN1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNAP47Q5SQN1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SNAP47Q5SQN1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms