Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 PEX10YDR265W 1014 nt2.58□□□□□ -2
TY1B-JR1P47098 YKL075CYKL075C 1353 nt2.58□□□□□ -2
TY1B-JR1P47098 PSD2YGR170W 3417 nt2.57□□□□□ -2
TY1B-JR1P47098 YMR306C-AYMR306C-A 390 nt2.57□□□□□ -2
TY1B-JR1P47098 HAT1YPL001W 1125 nt2.57□□□□□ -2
TY1B-JR1P47098 ARA1YBR149W 1035 nt2.57□□□□□ -2
TY1B-JR1P47098 TVP15YDR100W 432 nt2.56□□□□□ -2
TY1B-JR1P47098 ECM13YBL043W 774 nt2.56□□□□□ -2
TY1B-JR1P47098 SHE4YOR035C 2370 nt2.56□□□□□ -2
TY1B-JR1P47098 YRB30YGL164C 1323 nt2.56□□□□□ -2
TY1B-JR1P47098 VPS16YPL045W 2397 nt2.56□□□□□ -2
TY1B-JR1P47098 VPS8YAL002W 3825 nt2.55□□□□□ -2
TY1B-JR1P47098 POL2YNL262W 6669 nt2.55□□□□□ -2
TY1B-JR1P47098 YML096WYML096W 1578 nt2.55□□□□□ -2
TY1B-JR1P47098 VMA8YEL051W 771 nt2.55□□□□□ -2
TY1B-JR1P47098 SPS18YNL204C 903 nt2.55□□□□□ -2
TY1B-JR1P47098 YOL079WYOL079W 399 nt2.55□□□□□ -2
TY1B-JR1P47098 YGR130CYGR130C 2451 nt2.55□□□□□ -2
TY1B-JR1P47098 IKI1YHR187W 930 nt2.54□□□□□ -2
TY1B-JR1P47098 YMR141CYMR141C 309 nt2.54□□□□□ -2
TY1B-JR1P47098 PDR17YNL264C 1053 nt2.54□□□□□ -2
TY1B-JR1P47098 MSS116YDR194C 1995 nt2.54□□□□□ -2
TY1B-JR1P47098 BUD6YLR319C 2367 nt2.54□□□□□ -2
TY1B-JR1P47098 RTP1YMR185W 2946 nt2.54□□□□□ -2
TY1B-JR1P47098 MRPS17YMR188C 714 nt2.54□□□□□ -2
TY1B-JR1P47098 PZF1YPR186C 1290 nt2.54□□□□□ -2
TY1B-JR1P47098 YPR203WYPR203W 309 nt2.54□□□□□ -2
TY1B-JR1P47098 ORC4YPR162C 1590 nt2.54□□□□□ -2
TY1B-JR1P47098 STE12YHR084W 2067 nt2.53□□□□□ -2
TY1B-JR1P47098 IMH1YLR309C 2736 nt2.53□□□□□ -2
TY1B-JR1P47098 YDR239CYDR239C 2364 nt2.53□□□□□ -2
TY1B-JR1P47098 YDL242WYDL242W 354 nt2.53□□□□□ -2
TY1B-JR1P47098 YML090WYML090W 387 nt2.53□□□□□ -2
TY1B-JR1P47098 IBD2YNL164C 1056 nt2.53□□□□□ -2
TY1B-JR1P47098 LRE1YCL051W 1752 nt2.53□□□□□ -2
TY1B-JR1P47098 CSI1YMR025W 888 nt2.52□□□□□ -2.01
TY1B-JR1P47098 SMC1YFL008W 3678 nt2.52□□□□□ -2.01
TY1B-JR1P47098 KRE2YDR483W 1329 nt2.52□□□□□ -2.01
TY1B-JR1P47098 RUF21RUF21 707 nt2.51□□□□□ -2.01
TY1B-JR1P47098 ARO7YPR060C 771 nt2.51□□□□□ -2.01
TY1B-JR1P47098 SEC16YPL085W 6588 nt2.51□□□□□ -2.01
TY1B-JR1P47098 SKT5YBL061C 2091 nt2.51□□□□□ -2.01
TY1B-JR1P47098 NET1YJL076W 3570 nt2.51□□□□□ -2.01
TY1B-JR1P47098 MOT1YPL082C 5604 nt2.51□□□□□ -2.01
TY1B-JR1P47098 MRPL17YNL252C 846 nt2.51□□□□□ -2.01
TY1B-JR1P47098 CDC31YOR257W 486 nt2.51□□□□□ -2.01
TY1B-JR1P47098 APL2YKL135C 2181 nt2.51□□□□□ -2.01
TY1B-JR1P47098 IRC10YOL015W 1761 nt2.5□□□□□ -2.01
TY1B-JR1P47098 YER068C-AYER068C-A 432 nt2.5□□□□□ -2.01
TY1B-JR1P47098 CAP1YKL007W 807 nt2.5□□□□□ -2.01
TY1B-JR1P47098 TPS2YDR074W 2691 nt2.5□□□□□ -2.01
TY1B-JR1P47098 YOR365CYOR365C 2112 nt2.5□□□□□ -2.01
TY1B-JR1P47098 YFH1YDL120W 525 nt2.49□□□□□ -2.01
TY1B-JR1P47098 RTT102YGR275W 474 nt2.49□□□□□ -2.01
TY1B-JR1P47098 PAI3YMR174C 207 nt2.49□□□□□ -2.01
TY1B-JR1P47098 MGA2YIR033W 3342 nt2.49□□□□□ -2.01
TY1B-JR1P47098 YDR203WYDR203W 318 nt2.49□□□□□ -2.01
TY1B-JR1P47098 CAB2YIL083C 1098 nt2.49□□□□□ -2.01
TY1B-JR1P47098 CYR1YJL005W 6081 nt2.48□□□□□ -2.01
TY1B-JR1P47098 YJL028WYJL028W 336 nt2.48□□□□□ -2.01
TY1B-JR1P47098 CWC24YLR323C 780 nt2.48□□□□□ -2.01
TY1B-JR1P47098 REC114YMR133W 1287 nt2.48□□□□□ -2.01
TY1B-JR1P47098 YOR097CYOR097C 528 nt2.48□□□□□ -2.01
TY1B-JR1P47098 TUS1YLR425W 3924 nt2.47□□□□□ -2.01
TY1B-JR1P47098 YDL118WYDL118W 381 nt2.47□□□□□ -2.01
TY1B-JR1P47098 MET6YER091C 2304 nt2.47□□□□□ -2.01
TY1B-JR1P47098 GEA1YJR031C 4227 nt2.47□□□□□ -2.01
TY1B-JR1P47098 ACM1YPL267W 630 nt2.46□□□□□ -2.02
TY1B-JR1P47098 ARL1YBR164C 552 nt2.46□□□□□ -2.02
TY1B-JR1P47098 IRA1YBR140C 9279 nt2.46□□□□□ -2.02
TY1B-JR1P47098 YPR1YDR368W 939 nt2.46□□□□□ -2.02
TY1B-JR1P47098 MPP6YNR024W 561 nt2.46□□□□□ -2.02
TY1B-JR1P47098 SIL1YOL031C 1266 nt2.46□□□□□ -2.02
TY1B-JR1P47098 FES1YBR101C 873 nt2.46□□□□□ -2.02
TY1B-JR1P47098 YPR117WYPR117W 7470 nt2.46□□□□□ -2.02
TY1B-JR1P47098 SAD1YFR005C 1347 nt2.45□□□□□ -2.02
TY1B-JR1P47098 PDP3YLR455W 915 nt2.45□□□□□ -2.02
TY1B-JR1P47098 YML053CYML053C 639 nt2.45□□□□□ -2.02
TY1B-JR1P47098 AFT2YPL202C 1251 nt2.45□□□□□ -2.02
TY1B-JR1P47098 PHO13YDL236W 939 nt2.44□□□□□ -2.02
TY1B-JR1P47098 NSE1YLR007W 1011 nt2.44□□□□□ -2.02
TY1B-JR1P47098 YNL165WYNL165W 1221 nt2.44□□□□□ -2.02
TY1B-JR1P47098 PEX11YOL147C 711 nt2.44□□□□□ -2.02
TY1B-JR1P47098 STD1YOR047C 1335 nt2.44□□□□□ -2.02
TY1B-JR1P47098 GGA1YDR358W 1674 nt2.44□□□□□ -2.02
TY1B-JR1P47098 CBS2YDR197W 1170 nt2.44□□□□□ -2.02
TY1B-JR1P47098 YOR114WYOR114W 885 nt2.44□□□□□ -2.02
TY1B-JR1P47098 CPA2YJR109C 3357 nt2.43□□□□□ -2.02
TY1B-JR1P47098 YPK1YKL126W 2043 nt2.43□□□□□ -2.02
TY1B-JR1P47098 SDT1YGL224C 843 nt2.42□□□□□ -2.02
TY1B-JR1P47098 LCB4YOR171C 1875 nt2.42□□□□□ -2.02
TY1B-JR1P47098 CDC60YPL160W 3273 nt2.42□□□□□ -2.02
TY1B-JR1P47098 PAC1YOR269W 1485 nt2.42□□□□□ -2.02
TY1B-JR1P47098 TMA22YJR014W 597 nt2.41□□□□□ -2.02
TY1B-JR1P47098 YJR111CYJR111C 852 nt2.41□□□□□ -2.02
TY1B-JR1P47098 FAR11YNL127W 2862 nt2.41□□□□□ -2.02
TY1B-JR1P47098 ROY1YMR258C 1662 nt2.41□□□□□ -2.02
TY1B-JR1P47098 YNL144CYNL144C 2223 nt2.41□□□□□ -2.02
TY1B-JR1P47098 COG4YPR105C 2586 nt2.41□□□□□ -2.02
TY1B-JR1P47098 CDC123YLR215C 1083 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 62 ms