Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 SLD5YDR489W 885 nt3.49□□□□□ -1.85
TY2A-FP0CX61 SMT3YDR510W 306 nt3.49□□□□□ -1.85
TY2A-FP0CX61 YIP1YGR172C 747 nt3.49□□□□□ -1.85
TY2A-FP0CX61 YLR416CYLR416C 399 nt3.49□□□□□ -1.85
TY2A-FP0CX61 VMA6YLR447C 1038 nt3.49□□□□□ -1.85
TY2A-FP0CX61 YOL114CYOL114C 609 nt3.49□□□□□ -1.85
TY2A-FP0CX61 YKL075CYKL075C 1353 nt3.49□□□□□ -1.85
TY2A-FP0CX61 SWH1YAR042W 3567 nt3.48□□□□□ -1.85
TY2A-FP0CX61 TAF7YMR227C 1773 nt3.48□□□□□ -1.85
TY2A-FP0CX61 TDA1YMR291W 1761 nt3.48□□□□□ -1.85
TY2A-FP0CX61 YNL011CYNL011C 1335 nt3.48□□□□□ -1.85
TY2A-FP0CX61 APE2YKL157W 2859 nt3.48□□□□□ -1.85
TY2A-FP0CX61 YDL071CYDL071C 375 nt3.48□□□□□ -1.85
TY2A-FP0CX61 DTD1YDL219W 453 nt3.48□□□□□ -1.85
TY2A-FP0CX61 FMN1YDR236C 657 nt3.48□□□□□ -1.85
TY2A-FP0CX61 QCR10YHR001W-A 234 nt3.48□□□□□ -1.85
TY2A-FP0CX61 DPH1YIL103W 1278 nt3.48□□□□□ -1.85
TY2A-FP0CX61 YKR011CYKR011C 1062 nt3.48□□□□□ -1.85
TY2A-FP0CX61 VAM10YOR068C 345 nt3.48□□□□□ -1.85
TY2A-FP0CX61 APD1YBR151W 951 nt3.48□□□□□ -1.85
TY2A-FP0CX61 ECM16YMR128W 3804 nt3.48□□□□□ -1.85
TY2A-FP0CX61 CCM1YGR150C 2595 nt3.48□□□□□ -1.85
TY2A-FP0CX61 TRS120YDR407C 3870 nt3.47□□□□□ -1.85
TY2A-FP0CX61 GCN5YGR252W 1320 nt3.47□□□□□ -1.85
TY2A-FP0CX61 RPO31YOR116C 4383 nt3.47□□□□□ -1.85
TY2A-FP0CX61 TRX3YCR083W 384 nt3.47□□□□□ -1.85
TY2A-FP0CX61 OCA6YDR067C 675 nt3.47□□□□□ -1.85
TY2A-FP0CX61 YDR271CYDR271C 372 nt3.47□□□□□ -1.85
TY2A-FP0CX61 YGL152CYGL152C 678 nt3.47□□□□□ -1.85
TY2A-FP0CX61 THG1YGR024C 714 nt3.47□□□□□ -1.85
TY2A-FP0CX61 VMA10YHR039C-A 345 nt3.47□□□□□ -1.85
TY2A-FP0CX61 GTT2YLL060C 702 nt3.47□□□□□ -1.85
TY2A-FP0CX61 SUS1YBR111W-A 291 nt3.47□□□□□ -1.85
TY2A-FP0CX61 snR35snR35 204 nt3.47□□□□□ -1.85
TY2A-FP0CX61 YGR237CYGR237C 2358 nt3.47□□□□□ -1.85
TY2A-FP0CX61 RIM4YHL024W 2142 nt3.47□□□□□ -1.85
TY2A-FP0CX61 MNL1YHR204W 2391 nt3.47□□□□□ -1.85
TY2A-FP0CX61 ATP25YMR098C 1839 nt3.47□□□□□ -1.85
TY2A-FP0CX61 SRP68YPL243W 1800 nt3.47□□□□□ -1.85
TY2A-FP0CX61 TRK1YJL129C 3708 nt3.46□□□□□ -1.85
TY2A-FP0CX61 YPS6YIR039C 1614 nt3.46□□□□□ -1.86
TY2A-FP0CX61 SMX2YFL017W-A 234 nt3.46□□□□□ -1.86
TY2A-FP0CX61 SEC53YFL045C 765 nt3.46□□□□□ -1.86
TY2A-FP0CX61 EMC4YGL231C 573 nt3.46□□□□□ -1.86
TY2A-FP0CX61 EFG1YGR271C-A 702 nt3.46□□□□□ -1.86
TY2A-FP0CX61 YKL070WYKL070W 510 nt3.46□□□□□ -1.86
TY2A-FP0CX61 MRPL16YBL038W 699 nt3.46□□□□□ -1.86
TY2A-FP0CX61 IZH2YOL002C 954 nt3.46□□□□□ -1.86
TY2A-FP0CX61 GCY1YOR120W 939 nt3.46□□□□□ -1.86
TY2A-FP0CX61 SHG1YBR258C 429 nt3.46□□□□□ -1.86
TY2A-FP0CX61 ATG26YLR189C 3597 nt3.46□□□□□ -1.86
TY2A-FP0CX61 POL4YCR014C 1749 nt3.45□□□□□ -1.86
TY2A-FP0CX61 FAD1YDL045C 921 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YER046W-AYER046W-A 330 nt3.45□□□□□ -1.86
TY2A-FP0CX61 RPL1BYGL135W 654 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YHR050W-AYHR050W-A 171 nt3.45□□□□□ -1.86
TY2A-FP0CX61 DSE2YHR143W 978 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YHR212CYHR212C 336 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YIL141WYIL141W 390 nt3.45□□□□□ -1.86
TY2A-FP0CX61 IME1YJR094C 1083 nt3.45□□□□□ -1.86
TY2A-FP0CX61 TMA19YKL056C 504 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YKL156C-AYKL156C-A 117 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YKE2YLR200W 345 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YAR060CYAR060C 336 nt3.45□□□□□ -1.86
TY2A-FP0CX61 PAI3YMR174C 207 nt3.45□□□□□ -1.86
TY2A-FP0CX61 OCA2YNL056W 594 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YRO2YBR054W 1035 nt3.45□□□□□ -1.86
TY2A-FP0CX61 RPL1AYPL220W 654 nt3.45□□□□□ -1.86
TY2A-FP0CX61 LTP1YPR073C 486 nt3.45□□□□□ -1.86
TY2A-FP0CX61 MSD1YPL104W 1977 nt3.45□□□□□ -1.86
TY2A-FP0CX61 RNR1YER070W 2667 nt3.45□□□□□ -1.86
TY2A-FP0CX61 YLR446WYLR446W 1302 nt3.44□□□□□ -1.86
TY2A-FP0CX61 MRS2YOR334W 1413 nt3.44□□□□□ -1.86
TY2A-FP0CX61 SPT10YJL127C 1923 nt3.44□□□□□ -1.86
TY2A-FP0CX61 CDC40YDR364C 1368 nt3.44□□□□□ -1.86
TY2A-FP0CX61 YCR085WYCR085W 354 nt3.44□□□□□ -1.86
TY2A-FP0CX61 AAD3YCR107W 1092 nt3.44□□□□□ -1.86
TY2A-FP0CX61 YDR461C-AYDR461C-A 243 nt3.44□□□□□ -1.86
TY2A-FP0CX61 COG2YGR120C 789 nt3.44□□□□□ -1.86
TY2A-FP0CX61 YLL044WYLL044W 447 nt3.44□□□□□ -1.86
TY2A-FP0CX61 IES3YLR052W 753 nt3.44□□□□□ -1.86
TY2A-FP0CX61 RPC40YPR110C 1008 nt3.44□□□□□ -1.86
TY2A-FP0CX61 YPR022CYPR022C 3402 nt3.44□□□□□ -1.86
TY2A-FP0CX61 RED1YLR263W 2484 nt3.43□□□□□ -1.86
TY2A-FP0CX61 PBP4YDL053C 558 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YDR029WYDR029W 315 nt3.43□□□□□ -1.86
TY2A-FP0CX61 RPS13YDR064W 456 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YGL074CYGL074C 327 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YGR126WYGR126W 693 nt3.43□□□□□ -1.86
TY2A-FP0CX61 SGN1YIR001C 753 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YJR112W-AYJR112W-A 330 nt3.43□□□□□ -1.86
TY2A-FP0CX61 SFT1YKL006C-A 294 nt3.43□□□□□ -1.86
TY2A-FP0CX61 IDP2YLR174W 1239 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YLR202CYLR202C 327 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YNL184CYNL184C 327 nt3.43□□□□□ -1.86
TY2A-FP0CX61 PEX11YOL147C 711 nt3.43□□□□□ -1.86
TY2A-FP0CX61 YPR053CYPR053C 456 nt3.43□□□□□ -1.86
TY2A-FP0CX61 DER1YBR201W 636 nt3.43□□□□□ -1.86
TY2A-FP0CX61 IOC2YLR095C 2439 nt3.43□□□□□ -1.86
TY2A-FP0CX61 HBT1YDL223C 3141 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 81.9 ms