Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 AC009237.3-201ENST00000393279 1427 ntBASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 MIR572-201ENST00000384983 95 ntBASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 SUDS3P1-201ENST00000505831 966 ntBASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 AC005837.3-201ENST00000612163 286 ntBASIC15.27■□□□□ 0.04
TRGV1A0A0A0MS02 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV1A0A0A0MS02 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.27■□□□□ 0.03
TRGV1A0A0A0MS02 Z98882.1-201ENST00000622160 2253 ntBASIC15.27■□□□□ 0.03
TRGV1A0A0A0MS02 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 AC003102.1-202ENST00000563394 1796 ntBASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 AL137060.1-201ENST00000618151 2648 ntBASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV1A0A0A0MS02 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 BX005040.4-201ENST00000637145 1518 ntBASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 AC026310.3-201ENST00000625186 2373 ntBASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRGV1A0A0A0MS02 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRGV1A0A0A0MS02 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms