Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CAPN7Q9Y6W3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 THA1P-201ENST00000590384 1145 ntBASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CAPN7Q9Y6W3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 AC098818.2-201ENST00000564925 2320 ntBASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 SMG8-203ENST00000578922 2178 ntBASIC21.09■□□□□ 0.97
CAPN7Q9Y6W3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 KRT18P24-201ENST00000344739 1156 ntBASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN7Q9Y6W3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CAPN7Q9Y6W3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN7Q9Y6W3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN7Q9Y6W3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN7Q9Y6W3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CAPN7Q9Y6W3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 U85056.1-201ENST00000616429 682 ntBASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 AC009086.3-201ENST00000623486 1008 ntBASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 FP325331.1-202ENST00000623531 1380 ntBASIC21.07■□□□□ 0.96
CAPN7Q9Y6W3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms