Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHAC2Q9Y5I4 AC003102.1-202ENST00000563394 1796 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 POU5F1P4-201ENST00000413175 1085 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 DUSP5P2-201ENST00000426873 1033 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 OR2A1-AS1-201ENST00000462305 773 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 AC091874.3-201ENST00000512672 1195 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 AC026471.6-201ENST00000622954 1905 ntBASIC25.33■■□□□ 1.65
PCDHAC2Q9Y5I4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 AC120498.10-201ENST00000621827 505 ntBASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHAC2Q9Y5I4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 ESRRAP1-201ENST00000400596 1257 ntBASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDHAC2Q9Y5I4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 AC097658.1-201ENST00000475555 843 ntBASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 AL591742.1-201ENST00000604433 565 ntBASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC2Q9Y5I4 KRT16P2-201ENST00000414673 1423 ntBASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDHAC2Q9Y5I4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PCDHAC2Q9Y5I4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 AL355472.2-201ENST00000422958 438 ntBASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHAC2Q9Y5I4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHAC2Q9Y5I4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms