Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 AC009102.2-201ENST00000606772 1639 ntBASIC18.18■□□□□ 0.5
BEST4Q8NFU0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST4Q8NFU0 AC021242.3-201ENST00000607598 1377 ntBASIC18.17■□□□□ 0.5
BEST4Q8NFU0 AL020996.1-203ENST00000536896 2307 ntBASIC18.17■□□□□ 0.5
BEST4Q8NFU0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BEST4Q8NFU0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 AL031848.2-201ENST00000607670 837 ntBASIC18.16■□□□□ 0.5
BEST4Q8NFU0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
BEST4Q8NFU0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.15■□□□□ 0.5
BEST4Q8NFU0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST4Q8NFU0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
BEST4Q8NFU0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
BEST4Q8NFU0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 BX664725.1-201ENST00000438252 379 ntBASIC18.14■□□□□ 0.49
BEST4Q8NFU0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.14■□□□□ 0.49
BEST4Q8NFU0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST4Q8NFU0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST4Q8NFU0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
BEST4Q8NFU0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BEST4Q8NFU0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST4Q8NFU0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.13■□□□□ 0.49
BEST4Q8NFU0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms