Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SNAP47Q5SQN1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 C9orf163-202ENST00000624034 2573 ntBASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 AC007322.1-201ENST00000426983 750 ntBASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 AC010141.2-201ENST00000452426 721 ntBASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 DUX4L16-201ENST00000555130 1264 ntBASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SNAP47Q5SQN1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 NCF1B-203ENST00000435988 1254 ntBASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 AC138907.5-202ENST00000569484 235 ntBASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 AC231657.2-201ENST00000624556 255 ntBASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SNAP47Q5SQN1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 GPX1P1-201ENST00000388829 606 ntBASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 AC005181.1-201ENST00000604782 1256 ntBASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAP47Q5SQN1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.46■□□□□ 0.87
SNAP47Q5SQN1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNAP47Q5SQN1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms