Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ITM2AO43736 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ITM2AO43736 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.73■□□□□ 0.91
ITM2AO43736 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.73■□□□□ 0.91
ITM2AO43736 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ITM2AO43736 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.73■□□□□ 0.91
ITM2AO43736 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ITM2AO43736 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ITM2AO43736 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ITM2AO43736 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ITM2AO43736 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ITM2AO43736 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ITM2AO43736 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.72■□□□□ 0.91
ITM2AO43736 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
ITM2AO43736 AC073314.1-201ENST00000568729 2216 ntBASIC20.72■□□□□ 0.91
ITM2AO43736 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
ITM2AO43736 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ITM2AO43736 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
ITM2AO43736 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
ITM2AO43736 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 KRT16P3-201ENST00000439127 1283 ntBASIC20.71■□□□□ 0.91
ITM2AO43736 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.71■□□□□ 0.91
ITM2AO43736 PLK5-205ENST00000642079 1969 ntBASIC20.71■□□□□ 0.91
ITM2AO43736 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ITM2AO43736 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.71■□□□□ 0.91
ITM2AO43736 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
ITM2AO43736 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ITM2AO43736 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ITM2AO43736 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.7■□□□□ 0.9
ITM2AO43736 AL034346.1-201ENST00000568244 1277 ntBASIC20.7■□□□□ 0.9
ITM2AO43736 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ITM2AO43736 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ITM2AO43736 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 AP005212.1-201ENST00000581547 1997 ntBASIC20.69■□□□□ 0.9
ITM2AO43736 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.69■□□□□ 0.9
ITM2AO43736 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ITM2AO43736 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.69■□□□□ 0.9
ITM2AO43736 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ITM2AO43736 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
ITM2AO43736 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ITM2AO43736 AC006128.1-201ENST00000624704 1661 ntBASIC20.68■□□□□ 0.9
ITM2AO43736 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ITM2AO43736 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.68■□□□□ 0.9
ITM2AO43736 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 GABARAPL3-202ENST00000624044 1851 ntBASIC20.68■□□□□ 0.9
ITM2AO43736 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.68■□□□□ 0.9
ITM2AO43736 AL391422.3-201ENST00000603791 2761 ntBASIC20.68■□□□□ 0.9
ITM2AO43736 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ITM2AO43736 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.68■□□□□ 0.9
ITM2AO43736 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITM2AO43736 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.67■□□□□ 0.9
ITM2AO43736 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ITM2AO43736 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ITM2AO43736 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.67■□□□□ 0.9
ITM2AO43736 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms