Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 ECEL1P1-201ENST00000373592 1742 ntBASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC123595.1-201ENST00000440769 1046 ntBASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 YBX1P1-201ENST00000445822 960 ntBASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRBV23-1A0A0A0MS06 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV23-1A0A0A0MS06 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
TRBV23-1A0A0A0MS06 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV23-1A0A0A0MS06 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 MIR6084-201ENST00000622012 110 ntBASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC092053.2-201ENST00000640557 1818 ntBASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV23-1A0A0A0MS06 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 LINC02228-203ENST00000641970 1355 ntBASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV23-1A0A0A0MS06 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC007952.6-201ENST00000573168 2673 ntBASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 AC003957.1-201ENST00000625108 2673 ntBASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 TPRG1LP1-201ENST00000598702 760 ntBASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV23-1A0A0A0MS06 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms