Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEFF1Q8IYR6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEFF1Q8IYR6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TMEFF1Q8IYR6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 AC083880.1-201ENST00000608266 535 ntBASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TMEFF1Q8IYR6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 DUSP5P2-201ENST00000426873 1033 ntBASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 AC097658.1-201ENST00000475555 843 ntBASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 AC008175.2-201ENST00000612840 297 ntBASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEFF1Q8IYR6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 ESRRAP1-201ENST00000400596 1257 ntBASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEFF1Q8IYR6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 AC098590.1-201ENST00000468126 897 ntBASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEFF1Q8IYR6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEFF1Q8IYR6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 MYC-209ENST00000641252 345 ntBASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEFF1Q8IYR6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms