Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPAQ5VT25 KRT18P29-201ENST00000397031 1267 ntBASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPAQ5VT25 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDC42BPAQ5VT25 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 AC120498.10-201ENST00000621827 505 ntBASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.46■■■□□ 2.79
CDC42BPAQ5VT25 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.79
CDC42BPAQ5VT25 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC32.45■■■□□ 2.79
CDC42BPAQ5VT25 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDC42BPAQ5VT25 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CDC42BPAQ5VT25 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
CDC42BPAQ5VT25 AC008694.1-202ENST00000636953 945 ntBASIC32.45■■■□□ 2.78
CDC42BPAQ5VT25 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 UNC93B5-201ENST00000530315 699 ntBASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC32.44■■■□□ 2.78
CDC42BPAQ5VT25 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 RARG-204ENST00000543726 1779 ntTSL 2 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.43■■■□□ 2.78
CDC42BPAQ5VT25 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.42■■■□□ 2.78
CDC42BPAQ5VT25 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CDC42BPAQ5VT25 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 AC097658.1-201ENST00000475555 843 ntBASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDC42BPAQ5VT25 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDC42BPAQ5VT25 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.39■■■□□ 2.78
CDC42BPAQ5VT25 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.39■■■□□ 2.78
CDC42BPAQ5VT25 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.39■■■□□ 2.78
CDC42BPAQ5VT25 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
CDC42BPAQ5VT25 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC32.38■■■□□ 2.77
CDC42BPAQ5VT25 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms