Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.87■□□□□ 0.61
CSNK1A1P48729 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.86■□□□□ 0.61
CSNK1A1P48729 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CSNK1A1P48729 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 AC055733.4-201ENST00000638462 1354 ntBASIC18.85■□□□□ 0.61
CSNK1A1P48729 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CSNK1A1P48729 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
CSNK1A1P48729 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1A1P48729 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1A1P48729 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1A1P48729 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
CSNK1A1P48729 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CSNK1A1P48729 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CSNK1A1P48729 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CSNK1A1P48729 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.83■□□□□ 0.6
CSNK1A1P48729 AC027612.3-201ENST00000413684 1047 ntBASIC18.83■□□□□ 0.6
CSNK1A1P48729 ZNRF2P3-201ENST00000424200 374 ntBASIC18.83■□□□□ 0.6
CSNK1A1P48729 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK1A1P48729 TPRG1LP1-201ENST00000598702 760 ntBASIC18.83■□□□□ 0.6
CSNK1A1P48729 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CSNK1A1P48729 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSNK1A1P48729 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CSNK1A1P48729 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK1A1P48729 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.81■□□□□ 0.6
CSNK1A1P48729 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK1A1P48729 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CSNK1A1P48729 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms