Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KRT18P29-201ENST00000397031 1267 ntBASIC27.08■■□□□ 1.93
COL15A1P39059 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
COL15A1P39059 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL15A1P39059 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.92
COL15A1P39059 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
COL15A1P39059 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.07■■□□□ 1.92
COL15A1P39059 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.07■■□□□ 1.92
COL15A1P39059 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.07■■□□□ 1.92
COL15A1P39059 AC008694.1-202ENST00000636953 945 ntBASIC27.07■■□□□ 1.92
COL15A1P39059 MYC-209ENST00000641252 345 ntBASIC27.07■■□□□ 1.92
COL15A1P39059 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.07■■□□□ 1.92
COL15A1P39059 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL15A1P39059 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
COL15A1P39059 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.06■■□□□ 1.92
COL15A1P39059 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
COL15A1P39059 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.06■■□□□ 1.92
COL15A1P39059 BX276092.2-201ENST00000417668 665 ntBASIC27.06■■□□□ 1.92
COL15A1P39059 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.06■■□□□ 1.92
COL15A1P39059 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
COL15A1P39059 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.06■■□□□ 1.92
COL15A1P39059 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL15A1P39059 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL15A1P39059 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC27.05■■□□□ 1.92
COL15A1P39059 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.05■■□□□ 1.92
COL15A1P39059 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.05■■□□□ 1.92
COL15A1P39059 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL15A1P39059 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.05■■□□□ 1.92
COL15A1P39059 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC27.05■■□□□ 1.92
COL15A1P39059 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL15A1P39059 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
COL15A1P39059 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
COL15A1P39059 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC27.04■■□□□ 1.92
COL15A1P39059 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.04■■□□□ 1.92
COL15A1P39059 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
COL15A1P39059 AC098590.1-201ENST00000468126 897 ntBASIC27.04■■□□□ 1.92
COL15A1P39059 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.04■■□□□ 1.92
COL15A1P39059 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.04■■□□□ 1.92
COL15A1P39059 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL15A1P39059 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.04■■□□□ 1.92
COL15A1P39059 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
COL15A1P39059 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.03■■□□□ 1.92
COL15A1P39059 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27.03■■□□□ 1.92
COL15A1P39059 RNF146-206ENST00000480444 843 ntTSL 2 BASIC27.03■■□□□ 1.92
COL15A1P39059 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC27.03■■□□□ 1.92
COL15A1P39059 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
COL15A1P39059 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC27.03■■□□□ 1.92
COL15A1P39059 AC008175.2-201ENST00000612840 297 ntBASIC27.03■■□□□ 1.92
COL15A1P39059 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL15A1P39059 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.03■■□□□ 1.92
COL15A1P39059 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.03■■□□□ 1.92
COL15A1P39059 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.02■■□□□ 1.92
COL15A1P39059 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
COL15A1P39059 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.02■■□□□ 1.92
COL15A1P39059 RPS2P52-201ENST00000469610 820 ntBASIC27.02■■□□□ 1.92
COL15A1P39059 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC27.02■■□□□ 1.92
COL15A1P39059 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC27.02■■□□□ 1.92
COL15A1P39059 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL15A1P39059 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.02■■□□□ 1.92
COL15A1P39059 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.01■■□□□ 1.92
COL15A1P39059 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.01■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms