Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YMR141CYMR141C 309 nt4.61□□□□□ -1.67
TY1A-ER1P0CX71 RPL13BYMR142C 600 nt4.61□□□□□ -1.67
TY1A-ER1P0CX71 YPL107WYPL107W 747 nt4.61□□□□□ -1.67
TY1A-ER1P0CX71 YPL197CYPL197C 414 nt4.61□□□□□ -1.67
TY1A-ER1P0CX71 YBR242WYBR242W 717 nt4.61□□□□□ -1.67
TY1A-ER1P0CX71 TUP1YCR084C 2142 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 PUP2YGR253C 783 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 YMR295CYMR295C 594 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 RPS15YOL040C 429 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 YOR331CYOR331C 558 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 YAR1YPL239W 603 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 ARN1YHL040C 1884 nt4.6□□□□□ -1.67
TY1A-ER1P0CX71 VID30YGL227W 2877 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 YDR274CYDR274C 372 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 PMI40YER003C 1290 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 BNA6YFR047C 888 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 ARC1YGL105W 1131 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 KEX1YGL203C 2190 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 SOL4YGR248W 768 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 DED81YHR019C 1665 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 EPT1YHR123W 1176 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 SPC1YJR010C-A 285 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 BUL1YMR275C 2931 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 RRT16YNL105W 429 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 MNT4YNR059W 1743 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 YOR231C-AYOR231C-A 201 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 ICY2YPL250C 411 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 MBA1YBR185C 837 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 BIK1YCL029C 1323 nt4.59□□□□□ -1.67
TY1A-ER1P0CX71 NHA1YLR138W 2958 nt4.59□□□□□ -1.68
TY1A-ER1P0CX71 SWC4YGR002C 1431 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 MTM1YGR257C 1101 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 YIL029W-AYIL029W-A 372 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 YMR031W-AYMR031W-A 327 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 RIM9YMR063W 720 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 VAM10YOR068C 345 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 SWC3YAL011W 1878 nt4.58□□□□□ -1.68
TY1A-ER1P0CX71 DAL5YJR152W 1632 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 GPR1YDL035C 2886 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 PTR3YFR029W 2037 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 VHC1YBR235W 3363 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 MAK31YCR020C-A 267 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 MFA1YDR461W 111 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 SPO73YER046W 432 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 YFR010W-AYFR010W-A 189 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 OM45YIL136W 1182 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 HOC1YJR075W 1191 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 NNT1YLR285W 786 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 YPR174CYPR174C 666 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 AXL2YIL140W 2472 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 YFL034WYFL034W 3222 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 STB2YMR053C 2553 nt4.57□□□□□ -1.68
TY1A-ER1P0CX71 HAP1YLR256W 4509 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 PUT2YHR037W 1728 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 IDP2YLR174W 1239 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 PDP3YLR455W 915 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 YOR282WYOR282W 321 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 YPL035CYPL035C 348 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 AFT2YPL202C 1251 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 snR17bsnR17b 332 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 YPR096CYPR096C 303 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 SYF1YDR416W 2580 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 MPH3YJR160C 1809 nt4.56□□□□□ -1.68
TY1A-ER1P0CX71 GLN4YOR168W 2430 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 GDI1YER136W 1356 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 TGL3YMR313C 1929 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 snR59snR59 78 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 snR68snR68 136 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 THI13YDL244W 1023 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 LCL3YGL085W 825 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 ERV1YGR029W 570 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 YGR153WYGR153W 654 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 MAM33YIL070C 801 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 YRA2YKL214C 612 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 ERG3YLR056W 1098 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 BSC3YLR465C 309 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 YBL039W-BYBL039W-B 180 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 YNL043CYNL043C 321 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 THI12YNL332W 1023 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 GRE2YOL151W 1029 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 ARR2YPR200C 393 nt4.55□□□□□ -1.68
TY1A-ER1P0CX71 SYO1YDL063C 1863 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 SHE4YOR035C 2370 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 NDC80YIL144W 2076 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 STE20YHL007C 2820 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YDL071CYDL071C 375 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 AAD4YDL243C 990 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YER084WYER084W 387 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 AUA1YFL010W-A 285 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YPT32YGL210W 669 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 ECT1YGR007W 972 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 FYV4YHR059W 393 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 ABM1YJR108W 372 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 PRE5YMR314W 705 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 NOP15YNL110C 663 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YOL134CYOL134C 390 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YPL225WYPL225W 441 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YBR209WYBR209W 318 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YMR221CYMR221C 1515 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 FMP25YLR077W 1752 nt4.54□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 101 ms