Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.41■■□□□ 1.34
COL1A2P08123 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
COL1A2P08123 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A2P08123 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A2P08123 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.41■■□□□ 1.34
COL1A2P08123 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.41■■□□□ 1.34
COL1A2P08123 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
COL1A2P08123 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.41■■□□□ 1.34
COL1A2P08123 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
COL1A2P08123 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.41■■□□□ 1.34
COL1A2P08123 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.41■■□□□ 1.34
COL1A2P08123 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A2P08123 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL1A2P08123 AC068338.2-201ENST00000563278 1430 ntBASIC23.4■■□□□ 1.34
COL1A2P08123 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A2P08123 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
COL1A2P08123 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
COL1A2P08123 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.4■■□□□ 1.34
COL1A2P08123 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
COL1A2P08123 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
COL1A2P08123 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.4■■□□□ 1.34
COL1A2P08123 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.4■■□□□ 1.34
COL1A2P08123 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
COL1A2P08123 CYP2T1P-201ENST00000432607 1285 ntBASIC23.4■■□□□ 1.34
COL1A2P08123 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A2P08123 AF201337.1-201ENST00000520239 748 ntBASIC23.4■■□□□ 1.34
COL1A2P08123 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.4■■□□□ 1.34
COL1A2P08123 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
COL1A2P08123 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
COL1A2P08123 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.39■■□□□ 1.33
COL1A2P08123 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL1A2P08123 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL1A2P08123 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.39■■□□□ 1.33
COL1A2P08123 AC243732.1-201ENST00000612648 864 ntBASIC23.39■■□□□ 1.33
COL1A2P08123 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
COL1A2P08123 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
COL1A2P08123 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A2P08123 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.38■■□□□ 1.33
COL1A2P08123 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A2P08123 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.38■■□□□ 1.33
COL1A2P08123 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL1A2P08123 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.38■■□□□ 1.33
COL1A2P08123 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL1A2P08123 AC061975.6-201ENST00000579045 1553 ntBASIC23.38■■□□□ 1.33
COL1A2P08123 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.37■■□□□ 1.33
COL1A2P08123 RBM17P2-201ENST00000616397 1405 ntBASIC23.37■■□□□ 1.33
COL1A2P08123 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.37■■□□□ 1.33
COL1A2P08123 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL1A2P08123 SLC29A4P1-201ENST00000398760 971 ntBASIC23.37■■□□□ 1.33
COL1A2P08123 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.37■■□□□ 1.33
COL1A2P08123 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
COL1A2P08123 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.37■■□□□ 1.33
COL1A2P08123 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
COL1A2P08123 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.36■■□□□ 1.33
COL1A2P08123 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.36■■□□□ 1.33
COL1A2P08123 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 FAM99A-202ENST00000538190 1989 ntBASIC23.36■■□□□ 1.33
COL1A2P08123 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL1A2P08123 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.36■■□□□ 1.33
COL1A2P08123 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
COL1A2P08123 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.36■■□□□ 1.33
COL1A2P08123 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL1A2P08123 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL1A2P08123 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.36■■□□□ 1.33
COL1A2P08123 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL1A2P08123 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL1A2P08123 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL1A2P08123 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.35■■□□□ 1.33
COL1A2P08123 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.35■■□□□ 1.33
COL1A2P08123 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.35■■□□□ 1.33
COL1A2P08123 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.35■■□□□ 1.33
COL1A2P08123 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.35■■□□□ 1.33
COL1A2P08123 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
COL1A2P08123 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL1A2P08123 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms