Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV23-1A0A0A0MS06 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV23-1A0A0A0MS06 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV23-1A0A0A0MS06 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.83■□□□□ 0.45
TRBV23-1A0A0A0MS06 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV23-1A0A0A0MS06 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 GUSBP5-202ENST00000510805 1989 ntBASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.82■□□□□ 0.44
TRBV23-1A0A0A0MS06 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC027612.3-201ENST00000413684 1047 ntBASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 BX005040.4-201ENST00000637145 1518 ntBASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC009237.3-201ENST00000393279 1427 ntBASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC080038.3-201ENST00000623346 1952 ntBASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRBV23-1A0A0A0MS06 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV23-1A0A0A0MS06 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 AP004607.7-201ENST00000527152 1677 ntBASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV23-1A0A0A0MS06 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms