Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT78Q8N1N4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.52■□□□□ 0.88
KRT78Q8N1N4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
KRT78Q8N1N4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
KRT78Q8N1N4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT78Q8N1N4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
KRT78Q8N1N4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KRT78Q8N1N4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 AC026471.6-201ENST00000622954 1905 ntBASIC20.51■□□□□ 0.87
KRT78Q8N1N4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.51■□□□□ 0.87
KRT78Q8N1N4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
KRT78Q8N1N4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRT78Q8N1N4 AC244015.2-201ENST00000616358 1861 ntBASIC20.5■□□□□ 0.87
KRT78Q8N1N4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
KRT78Q8N1N4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 AC005224.4-201ENST00000583262 1652 ntBASIC20.48■□□□□ 0.87
KRT78Q8N1N4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
KRT78Q8N1N4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.47■□□□□ 0.87
KRT78Q8N1N4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
KRT78Q8N1N4 AC003102.1-202ENST00000563394 1796 ntBASIC20.46■□□□□ 0.87
KRT78Q8N1N4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms