Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.39■□□□□ 0.53
SFTPBP07988 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.39■□□□□ 0.53
SFTPBP07988 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SFTPBP07988 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.39■□□□□ 0.53
SFTPBP07988 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SFTPBP07988 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SFTPBP07988 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.39■□□□□ 0.53
SFTPBP07988 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SFTPBP07988 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SFTPBP07988 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 SUDS3P1-201ENST00000505831 966 ntBASIC18.38■□□□□ 0.53
SFTPBP07988 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.38■□□□□ 0.53
SFTPBP07988 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.38■□□□□ 0.53
SFTPBP07988 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SFTPBP07988 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.38■□□□□ 0.53
SFTPBP07988 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SFTPBP07988 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SFTPBP07988 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.37■□□□□ 0.53
SFTPBP07988 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.37■□□□□ 0.53
SFTPBP07988 AL138724.1-201ENST00000606771 1088 ntBASIC18.37■□□□□ 0.53
SFTPBP07988 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SFTPBP07988 AC011298.3-201ENST00000615796 283 ntBASIC18.37■□□□□ 0.53
SFTPBP07988 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.37■□□□□ 0.53
SFTPBP07988 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SFTPBP07988 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SFTPBP07988 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.37■□□□□ 0.53
SFTPBP07988 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SFTPBP07988 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SFTPBP07988 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 AC026310.3-201ENST00000625186 2373 ntBASIC18.37■□□□□ 0.53
SFTPBP07988 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SFTPBP07988 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFTPBP07988 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFTPBP07988 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFTPBP07988 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SFTPBP07988 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SFTPBP07988 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SFTPBP07988 AC079089.2-201ENST00000531211 1277 ntBASIC18.36■□□□□ 0.53
SFTPBP07988 AF213884.3-201ENST00000563833 479 ntBASIC18.36■□□□□ 0.53
SFTPBP07988 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.36■□□□□ 0.53
SFTPBP07988 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
SFTPBP07988 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.36■□□□□ 0.53
SFTPBP07988 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SFTPBP07988 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.36■□□□□ 0.53
SFTPBP07988 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SFTPBP07988 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SFTPBP07988 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SFTPBP07988 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SFTPBP07988 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.35■□□□□ 0.53
SFTPBP07988 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 MIR935-201ENST00000401179 91 ntBASIC18.35■□□□□ 0.53
SFTPBP07988 OR2I1P-207ENST00000453522 948 ntBASIC18.35■□□□□ 0.53
SFTPBP07988 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.35■□□□□ 0.53
SFTPBP07988 AP001330.3-201ENST00000520123 633 ntBASIC18.35■□□□□ 0.53
SFTPBP07988 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SFTPBP07988 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SFTPBP07988 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SFTPBP07988 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms