Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MIR6724-1-201ENST00000616420 92 ntBASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MIR6724-2-201ENST00000616483 92 ntBASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MIR6724-4-201ENST00000617390 92 ntBASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MIR6724-3-201ENST00000622482 92 ntBASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 AC005229.4-201ENST00000610085 2198 ntBASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-6A0A0B4J262 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 UNC93B8-201ENST00000511903 705 ntBASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 AC139530.1-201ENST00000575312 1977 ntBASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 AC087289.5-201ENST00000586076 3175 ntBASIC15.56■□□□□ 0.08
TRAV8-6A0A0B4J262 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-6A0A0B4J262 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-6A0A0B4J262 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-6A0A0B4J262 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms