Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 DUX4L4-201ENST00000566884 1269 ntBASIC18.34■□□□□ 0.53
BEST4Q8NFU0 MIR4508-201ENST00000584178 70 ntBASIC18.34■□□□□ 0.53
BEST4Q8NFU0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
BEST4Q8NFU0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
BEST4Q8NFU0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BEST4Q8NFU0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BEST4Q8NFU0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 PCDHAC2-203ENST00000615316 3011 ntBASIC18.31■□□□□ 0.52
BEST4Q8NFU0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 TSPY13P-201ENST00000338964 914 ntBASIC18.31■□□□□ 0.52
BEST4Q8NFU0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.31■□□□□ 0.52
BEST4Q8NFU0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 CA15P2-201ENST00000611168 834 ntBASIC18.3■□□□□ 0.52
BEST4Q8NFU0 MIR6722-201ENST00000617286 78 ntBASIC18.3■□□□□ 0.52
BEST4Q8NFU0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 AC004687.1-201ENST00000579003 1625 ntBASIC18.3■□□□□ 0.52
BEST4Q8NFU0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BEST4Q8NFU0 FEM1AP1-201ENST00000431297 1995 ntBASIC18.3■□□□□ 0.52
BEST4Q8NFU0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST4Q8NFU0 AC137630.3-201ENST00000607245 391 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms