Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 MIR3181-201ENST00000578512 73 ntBASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHA13Q9Y5I0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHA13Q9Y5I0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 AL157384.1-201ENST00000445995 2473 ntBASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
PCDHA13Q9Y5I0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 KRT16P3-201ENST00000439127 1283 ntBASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 OR2I1P-207ENST00000453522 948 ntBASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHA13Q9Y5I0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PCDHA13Q9Y5I0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.83■■□□□ 1.25
PCDHA13Q9Y5I0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHA13Q9Y5I0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHA13Q9Y5I0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
PCDHA13Q9Y5I0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PCDHA13Q9Y5I0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHA13Q9Y5I0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 AC010141.3-201ENST00000456659 717 ntBASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 AC087239.1-201ENST00000622671 572 ntBASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHA13Q9Y5I0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 AL356740.2-201ENST00000601559 647 ntBASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDHA13Q9Y5I0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHA13Q9Y5I0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms