Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 TERF1P5-201ENST00000477545 1207 ntBASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 AC093827.2-201ENST00000512654 315 ntBASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 RNA5SP413-201ENST00000516373 109 ntBASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEFF1Q8IYR6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TMEFF1Q8IYR6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMEFF1Q8IYR6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMEFF1Q8IYR6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.33■■□□□ 1
TMEFF1Q8IYR6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 ANOS2P-203ENST00000472227 1816 ntBASIC21.32■■□□□ 1
TMEFF1Q8IYR6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TMEFF1Q8IYR6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 AC068338.2-201ENST00000563278 1430 ntBASIC21.31■■□□□ 1
TMEFF1Q8IYR6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 MIPEPP3-201ENST00000412105 444 ntBASIC21.31■■□□□ 1
TMEFF1Q8IYR6 POU5F1P3-201ENST00000428824 1078 ntBASIC21.31■■□□□ 1
TMEFF1Q8IYR6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TMEFF1Q8IYR6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 MKRN4P-201ENST00000444706 1521 ntBASIC21.3■■□□□ 1
TMEFF1Q8IYR6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 CYP2T1P-201ENST00000432607 1285 ntBASIC21.3■■□□□ 1
TMEFF1Q8IYR6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TMEFF1Q8IYR6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 KRT18P29-201ENST00000397031 1267 ntBASIC21.29■■□□□ 1
TMEFF1Q8IYR6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 OR7E47P-201ENST00000546390 1422 ntBASIC21.29■■□□□ 1
TMEFF1Q8IYR6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TMEFF1Q8IYR6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.28■■□□□ 1
TMEFF1Q8IYR6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms