Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PLLP-204ENST00000569059 665 ntTSL 3 BASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 AC105036.2-201ENST00000569468 176 ntBASIC32.94■■■□□ 2.86
CDC42BPAQ5VT25 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC32.93■■■□□ 2.86
CDC42BPAQ5VT25 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.92■■■□□ 2.86
CDC42BPAQ5VT25 OR7E47P-201ENST00000546390 1422 ntBASIC32.91■■■□□ 2.86
CDC42BPAQ5VT25 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.91■■■□□ 2.86
CDC42BPAQ5VT25 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPAQ5VT25 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC32.91■■■□□ 2.86
CDC42BPAQ5VT25 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDC42BPAQ5VT25 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 AC083880.1-201ENST00000608266 535 ntBASIC32.9■■■□□ 2.86
CDC42BPAQ5VT25 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPAQ5VT25 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC32.89■■■□□ 2.86
CDC42BPAQ5VT25 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPAQ5VT25 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPAQ5VT25 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDC42BPAQ5VT25 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC32.88■■■□□ 2.85
CDC42BPAQ5VT25 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 MKRN4P-201ENST00000444706 1521 ntBASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.87■■■□□ 2.85
CDC42BPAQ5VT25 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 AC016405.3-201ENST00000607710 860 ntBASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 AC133041.1-202ENST00000642053 222 ntBASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC32.86■■■□□ 2.85
CDC42BPAQ5VT25 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 SLC7A5P1-201ENST00000568957 537 ntBASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.85■■■□□ 2.85
CDC42BPAQ5VT25 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDC42BPAQ5VT25 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDC42BPAQ5VT25 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 AC093827.2-201ENST00000512654 315 ntBASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 THRA-202ENST00000394121 2260 ntTSL 2 BASIC32.82■■■□□ 2.85
CDC42BPAQ5VT25 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 AC093787.1-201ENST00000450396 207 ntBASIC32.82■■■□□ 2.84
CDC42BPAQ5VT25 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.82■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms