Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
HMGCLP35914 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
HMGCLP35914 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.45■■□□□ 1.02
HMGCLP35914 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HMGCLP35914 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
HMGCLP35914 MIR6084-201ENST00000622012 110 ntBASIC21.45■■□□□ 1.02
HMGCLP35914 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HMGCLP35914 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGCLP35914 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
HMGCLP35914 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLP35914 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.44■■□□□ 1.02
HMGCLP35914 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLP35914 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.44■■□□□ 1.02
HMGCLP35914 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLP35914 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.44■■□□□ 1.02
HMGCLP35914 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.44■■□□□ 1.02
HMGCLP35914 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLP35914 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HMGCLP35914 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
HMGCLP35914 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGCLP35914 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 TPRG1LP1-201ENST00000598702 760 ntBASIC21.43■■□□□ 1.02
HMGCLP35914 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HMGCLP35914 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.43■■□□□ 1.02
HMGCLP35914 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLP35914 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLP35914 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLP35914 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLP35914 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HMGCLP35914 AP006587.3-201ENST00000525742 1516 ntBASIC21.42■■□□□ 1.02
HMGCLP35914 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.42■■□□□ 1.02
HMGCLP35914 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 AC005224.4-201ENST00000583262 1652 ntBASIC21.42■■□□□ 1.02
HMGCLP35914 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.42■■□□□ 1.02
HMGCLP35914 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.41■■□□□ 1.02
HMGCLP35914 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
HMGCLP35914 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.41■■□□□ 1.02
HMGCLP35914 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HMGCLP35914 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HMGCLP35914 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HMGCLP35914 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HMGCLP35914 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
HMGCLP35914 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLP35914 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
HMGCLP35914 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLP35914 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HMGCLP35914 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
HMGCLP35914 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.39■■□□□ 1.02
HMGCLP35914 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCLP35914 AC055733.4-201ENST00000638462 1354 ntBASIC21.39■■□□□ 1.02
HMGCLP35914 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HMGCLP35914 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HMGCLP35914 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HMGCLP35914 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.39■■□□□ 1.01
HMGCLP35914 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HMGCLP35914 AC123595.1-201ENST00000440769 1046 ntBASIC21.39■■□□□ 1.01
HMGCLP35914 YBX1P1-201ENST00000445822 960 ntBASIC21.39■■□□□ 1.01
HMGCLP35914 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCLP35914 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.39■■□□□ 1.01
HMGCLP35914 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.39■■□□□ 1.01
HMGCLP35914 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLP35914 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLP35914 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLP35914 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HMGCLP35914 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCLP35914 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
HMGCLP35914 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
HMGCLP35914 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLP35914 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.38■■□□□ 1.01
HMGCLP35914 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HMGCLP35914 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
HMGCLP35914 AC026471.6-201ENST00000622954 1905 ntBASIC21.38■■□□□ 1.01
HMGCLP35914 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.38■■□□□ 1.01
HMGCLP35914 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLP35914 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.38■■□□□ 1.01
HMGCLP35914 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms