Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 AC092667.1-201ENST00000434301 2586 ntBASIC20.41■□□□□ 0.86
NANOGQ9H9S0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NANOGQ9H9S0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 MTDHP2-201ENST00000601468 714 ntBASIC20.4■□□□□ 0.86
NANOGQ9H9S0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NANOGQ9H9S0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
NANOGQ9H9S0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NANOGQ9H9S0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.39■□□□□ 0.86
NANOGQ9H9S0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NANOGQ9H9S0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.39■□□□□ 0.85
NANOGQ9H9S0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 AC079089.2-201ENST00000531211 1277 ntBASIC20.38■□□□□ 0.85
NANOGQ9H9S0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 AL031602.1-201ENST00000633169 911 ntBASIC20.38■□□□□ 0.85
NANOGQ9H9S0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NANOGQ9H9S0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
NANOGQ9H9S0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 KRT125P-201ENST00000546827 989 ntBASIC20.36■□□□□ 0.85
NANOGQ9H9S0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 AL157384.1-201ENST00000445995 2473 ntBASIC20.36■□□□□ 0.85
NANOGQ9H9S0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NANOGQ9H9S0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 Z92544.1-202ENST00000571933 1220 ntBASIC20.35■□□□□ 0.85
NANOGQ9H9S0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms