Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-2Q9C056 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
NKX6-2Q9C056 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NKX6-2Q9C056 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 AC093536.1-201ENST00000569153 554 ntBASIC17.39■□□□□ 0.37
NKX6-2Q9C056 AC092296.2-201ENST00000589470 999 ntBASIC17.39■□□□□ 0.37
NKX6-2Q9C056 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-2Q9C056 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 AC090877.2-201ENST00000558441 1738 ntBASIC17.38■□□□□ 0.37
NKX6-2Q9C056 AFG3L1P-217ENST00000557444 2447 ntBASIC17.38■□□□□ 0.37
NKX6-2Q9C056 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-2Q9C056 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 FEM1AP1-201ENST00000431297 1995 ntBASIC17.37■□□□□ 0.37
NKX6-2Q9C056 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NKX6-2Q9C056 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.36■□□□□ 0.37
NKX6-2Q9C056 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 AC018445.3-201ENST00000624177 1945 ntBASIC17.36■□□□□ 0.37
NKX6-2Q9C056 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NKX6-2Q9C056 AL022069.1-201ENST00000568025 1636 ntBASIC17.36■□□□□ 0.37
NKX6-2Q9C056 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms