Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHCHD1Q96BP2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 SMPD5-203ENST00000639008 1464 ntBASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CHCHD1Q96BP2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 AL020996.1-203ENST00000536896 2307 ntBASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 AL157400.5-201ENST00000507624 621 ntBASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHCHD1Q96BP2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHCHD1Q96BP2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHCHD1Q96BP2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHCHD1Q96BP2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHCHD1Q96BP2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
CHCHD1Q96BP2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHCHD1Q96BP2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.71■□□□□ 0.1
CHCHD1Q96BP2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 AC131274.2-201ENST00000580697 1507 ntBASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 GABARAPL3-202ENST00000624044 1851 ntBASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHCHD1Q96BP2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms