Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 ECEL1P1-201ENST00000373592 1742 ntBASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 BX842568.3-201ENST00000418104 571 ntBASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 AP001330.3-201ENST00000520123 633 ntBASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIMC1Q8NDZ2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SIMC1Q8NDZ2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 AC233992.3-201ENST00000607491 485 ntBASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 LINC00526-201ENST00000581067 1875 ntBASIC20.32■□□□□ 0.84
SIMC1Q8NDZ2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 AC099791.1-201ENST00000416440 715 ntBASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 AF213884.3-201ENST00000563833 479 ntBASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIMC1Q8NDZ2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 EDA-201ENST00000338901 1233 ntBASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 SUDS3P1-201ENST00000505831 966 ntBASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 AL136967.2-201ENST00000623968 743 ntBASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SIMC1Q8NDZ2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 MIR939-201ENST00000401314 82 ntBASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 AL355001.2-201ENST00000620617 1191 ntBASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIMC1Q8NDZ2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SIMC1Q8NDZ2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SIMC1Q8NDZ2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms