Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 AL138724.1-201ENST00000606771 1088 ntBASIC22.46■■□□□ 1.19
RFX6Q8HWS3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFX6Q8HWS3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RFX6Q8HWS3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RFX6Q8HWS3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 AL136116.3-201ENST00000402907 1138 ntBASIC22.45■■□□□ 1.18
RFX6Q8HWS3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 AC068587.7-201ENST00000641602 218 ntBASIC22.45■■□□□ 1.18
RFX6Q8HWS3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RFX6Q8HWS3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 AC131212.1-201ENST00000613771 668 ntBASIC22.44■■□□□ 1.18
RFX6Q8HWS3 AC087239.1-201ENST00000622671 572 ntBASIC22.44■■□□□ 1.18
RFX6Q8HWS3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.44■■□□□ 1.18
RFX6Q8HWS3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 FAM99A-202ENST00000538190 1989 ntBASIC22.43■■□□□ 1.18
RFX6Q8HWS3 AC010542.4-201ENST00000563151 1910 ntBASIC22.43■■□□□ 1.18
RFX6Q8HWS3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RFX6Q8HWS3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 AC136469.2-201ENST00000623944 1028 ntBASIC22.42■■□□□ 1.18
RFX6Q8HWS3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
RFX6Q8HWS3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 OR7E47P-201ENST00000546390 1422 ntBASIC22.41■■□□□ 1.18
RFX6Q8HWS3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 AC010141.3-201ENST00000456659 717 ntBASIC22.41■■□□□ 1.18
RFX6Q8HWS3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 AC011298.3-201ENST00000615796 283 ntBASIC22.41■■□□□ 1.18
RFX6Q8HWS3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFX6Q8HWS3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RFX6Q8HWS3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms