Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 ERG25YGR060W 930 nt4.29□□□□□ -1.72
RPN11P43588 YBL029C-AYBL029C-A 285 nt4.29□□□□□ -1.72
RPN11P43588 YOR114WYOR114W 885 nt4.29□□□□□ -1.72
RPN11P43588 OXR1YPL196W 822 nt4.29□□□□□ -1.72
RPN11P43588 HUL4YJR036C 2679 nt4.29□□□□□ -1.72
RPN11P43588 GZF3YJL110C 1656 nt4.29□□□□□ -1.72
RPN11P43588 SLS1YLR139C 1932 nt4.29□□□□□ -1.72
RPN11P43588 YKL050CYKL050C 2769 nt4.28□□□□□ -1.72
RPN11P43588 STD1YOR047C 1335 nt4.28□□□□□ -1.72
RPN11P43588 YCL075WYCL075W 441 nt4.28□□□□□ -1.72
RPN11P43588 PLP1YDR183W 693 nt4.28□□□□□ -1.72
RPN11P43588 YHR212W-AYHR212W-A 204 nt4.28□□□□□ -1.72
RPN11P43588 PCL7YIL050W 858 nt4.28□□□□□ -1.72
RPN11P43588 RPL8BYLL045C 771 nt4.28□□□□□ -1.72
RPN11P43588 YAR061WYAR061W 204 nt4.28□□□□□ -1.72
RPN11P43588 DCS1YLR270W 1053 nt4.28□□□□□ -1.72
RPN11P43588 YLR365WYLR365W 333 nt4.28□□□□□ -1.72
RPN11P43588 THI80YOR143C 960 nt4.28□□□□□ -1.72
RPN11P43588 snR42snR42 351 nt4.28□□□□□ -1.72
RPN11P43588 GAL4YPL248C 2646 nt4.27□□□□□ -1.73
RPN11P43588 TRE1YPL176C 2352 nt4.27□□□□□ -1.73
RPN11P43588 MTC4YBR255W 2085 nt4.27□□□□□ -1.73
RPN11P43588 YIR021W-AYIR021W-A 213 nt4.27□□□□□ -1.73
RPN11P43588 YJL028WYJL028W 336 nt4.27□□□□□ -1.73
RPN11P43588 YNL144W-AYNL144W-A 84 nt4.27□□□□□ -1.73
RPN11P43588 STE6YKL209C 3873 nt4.27□□□□□ -1.73
RPN11P43588 SFI1YLL003W 2841 nt4.27□□□□□ -1.73
RPN11P43588 SEA4YBL104C 3117 nt4.26□□□□□ -1.73
RPN11P43588 RDI1YDL135C 609 nt4.26□□□□□ -1.73
RPN11P43588 YFR032C-BYFR032C-B 264 nt4.26□□□□□ -1.73
RPN11P43588 YGR107WYGR107W 450 nt4.26□□□□□ -1.73
RPN11P43588 YML094C-AYML094C-A 402 nt4.26□□□□□ -1.73
RPN11P43588 MER1YNL210W 813 nt4.26□□□□□ -1.73
RPN11P43588 CYC2YOR037W 1101 nt4.26□□□□□ -1.73
RPN11P43588 ARA1YBR149W 1035 nt4.26□□□□□ -1.73
RPN11P43588 POP4YBR257W 840 nt4.26□□□□□ -1.73
RPN11P43588 ERJ5YFR041C 888 nt4.25□□□□□ -1.73
RPN11P43588 YGL177WYGL177W 348 nt4.25□□□□□ -1.73
RPN11P43588 YGR269WYGR269W 327 nt4.25□□□□□ -1.73
RPN11P43588 COS8YHL048W 1146 nt4.25□□□□□ -1.73
RPN11P43588 REC104YHR157W 549 nt4.25□□□□□ -1.73
RPN11P43588 RPB3YIL021W 957 nt4.25□□□□□ -1.73
RPN11P43588 MNN11YJL183W 1269 nt4.25□□□□□ -1.73
RPN11P43588 LCL2YLR104W 396 nt4.25□□□□□ -1.73
RPN11P43588 YLR156WYLR156W 345 nt4.25□□□□□ -1.73
RPN11P43588 YLR159WYLR159W 345 nt4.25□□□□□ -1.73
RPN11P43588 YLR161WYLR161W 345 nt4.25□□□□□ -1.73
RPN11P43588 MOH1YBL049W 417 nt4.25□□□□□ -1.73
RPN11P43588 RRG9YNL213C 645 nt4.25□□□□□ -1.73
RPN11P43588 HAT1YPL001W 1125 nt4.25□□□□□ -1.73
RPN11P43588 MRP2YPR166C 348 nt4.25□□□□□ -1.73
RPN11P43588 OLE1YGL055W 1533 nt4.25□□□□□ -1.73
RPN11P43588 ALG1YBR110W 1350 nt4.25□□□□□ -1.73
RPN11P43588 PUF2YPR042C 3228 nt4.25□□□□□ -1.73
RPN11P43588 SPO1YNL012W 1896 nt4.24□□□□□ -1.73
RPN11P43588 SKM1YOL113W 1968 nt4.24□□□□□ -1.73
RPN11P43588 YDL158CYDL158C 309 nt4.24□□□□□ -1.73
RPN11P43588 YJL175WYJL175W 513 nt4.24□□□□□ -1.73
RPN11P43588 GSP1YLR293C 660 nt4.24□□□□□ -1.73
RPN11P43588 YBL096CYBL096C 309 nt4.24□□□□□ -1.73
RPN11P43588 PNO1YOR145C 825 nt4.24□□□□□ -1.73
RPN11P43588 YBR292CYBR292C 372 nt4.24□□□□□ -1.73
RPN11P43588 APA1YCL050C 966 nt4.24□□□□□ -1.73
RPN11P43588 STB2YMR053C 2553 nt4.24□□□□□ -1.73
RPN11P43588 PRP43YGL120C 2304 nt4.23□□□□□ -1.73
RPN11P43588 NAB6YML117W 3405 nt4.23□□□□□ -1.73
RPN11P43588 MAK11YKL021C 1407 nt4.23□□□□□ -1.73
RPN11P43588 BOI2YER114C 3123 nt4.23□□□□□ -1.73
RPN11P43588 MDR1YGR100W 2853 nt4.23□□□□□ -1.73
RPN11P43588 UBX5YDR330W 1503 nt4.23□□□□□ -1.73
RPN11P43588 YDL124WYDL124W 939 nt4.23□□□□□ -1.73
RPN11P43588 CUP1-1YHR053C 186 nt4.23□□□□□ -1.73
RPN11P43588 CUP1-2YHR055C 186 nt4.23□□□□□ -1.73
RPN11P43588 BET1YIL004C 429 nt4.23□□□□□ -1.73
RPN11P43588 CMC1YKL137W 336 nt4.23□□□□□ -1.73
RPN11P43588 RPL15AYLR029C 615 nt4.23□□□□□ -1.73
RPN11P43588 YBR255C-AYBR255C-A 363 nt4.23□□□□□ -1.73
RPN11P43588 THI7YLR237W 1797 nt4.22□□□□□ -1.73
RPN11P43588 STE23YLR389C 3084 nt4.22□□□□□ -1.73
RPN11P43588 PMS1YNL082W 2622 nt4.22□□□□□ -1.73
RPN11P43588 SOL3YHR163W 750 nt4.22□□□□□ -1.73
RPN11P43588 YKL162CYKL162C 1209 nt4.22□□□□□ -1.73
RPN11P43588 YAL066WYAL066W 309 nt4.22□□□□□ -1.73
RPN11P43588 TDA5YLR426W 981 nt4.22□□□□□ -1.73
RPN11P43588 ERG2YMR202W 669 nt4.22□□□□□ -1.73
RPN11P43588 UFE1YOR075W 1041 nt4.22□□□□□ -1.73
RPN11P43588 RPS12YOR369C 432 nt4.22□□□□□ -1.73
RPN11P43588 INA17YPL099C 549 nt4.22□□□□□ -1.73
RPN11P43588 YBR126W-AYBR126W-A 207 nt4.22□□□□□ -1.73
RPN11P43588 YBR137WYBR137W 540 nt4.22□□□□□ -1.73
RPN11P43588 SWH1YAR042W 3567 nt4.22□□□□□ -1.73
RPN11P43588 PBI1YPL272C 1554 nt4.22□□□□□ -1.73
RPN11P43588 ISC10YER180C 804 nt4.21□□□□□ -1.74
RPN11P43588 PML39YML107C 1005 nt4.21□□□□□ -1.74
RPN11P43588 YBL108WYBL108W 306 nt4.21□□□□□ -1.74
RPN11P43588 YCL021W-AYCL021W-A 378 nt4.21□□□□□ -1.74
RPN11P43588 HSE1YHL002W 1359 nt4.21□□□□□ -1.74
RPN11P43588 RPN4YDL020C 1596 nt4.21□□□□□ -1.74
RPN11P43588 NNK1YKL171W 2787 nt4.21□□□□□ -1.74
RPN11P43588 YPR1YDR368W 939 nt4.2□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 589.5 ms