Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGCLP35914 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HMGCLP35914 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMGCLP35914 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGCLP35914 AC012414.1-201ENST00000556676 535 ntBASIC21.57■■□□□ 1.04
HMGCLP35914 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMGCLP35914 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.57■■□□□ 1.04
HMGCLP35914 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGCLP35914 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.56■■□□□ 1.04
HMGCLP35914 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.56■■□□□ 1.04
HMGCLP35914 AL354811.1-201ENST00000610286 706 ntBASIC21.56■■□□□ 1.04
HMGCLP35914 AL358852.1-201ENST00000623174 1268 ntBASIC21.56■■□□□ 1.04
HMGCLP35914 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HMGCLP35914 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGCLP35914 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HMGCLP35914 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLP35914 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ZNRF2P3-201ENST00000424200 374 ntBASIC21.55■■□□□ 1.04
HMGCLP35914 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.55■■□□□ 1.04
HMGCLP35914 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGCLP35914 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLP35914 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
HMGCLP35914 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLP35914 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
HMGCLP35914 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 AL034346.1-201ENST00000568244 1277 ntBASIC21.54■■□□□ 1.04
HMGCLP35914 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.54■■□□□ 1.04
HMGCLP35914 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLP35914 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLP35914 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.53■■□□□ 1.04
HMGCLP35914 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.53■■□□□ 1.04
HMGCLP35914 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGCLP35914 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLP35914 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
HMGCLP35914 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLP35914 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGCLP35914 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.52■■□□□ 1.04
HMGCLP35914 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGCLP35914 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.52■■□□□ 1.04
HMGCLP35914 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HMGCLP35914 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLP35914 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
HMGCLP35914 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms