Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 SUR1YPL057C 1149 nt4.06□□□□□ -1.76
TY2A-FP0CX61 YBR116CYBR116C 528 nt4.06□□□□□ -1.76
TY2A-FP0CX61 ERV15YBR210W 429 nt4.06□□□□□ -1.76
TY2A-FP0CX61 POF1YCL047C 777 nt4.06□□□□□ -1.76
TY2A-FP0CX61 SEC59YMR013C 1560 nt4.06□□□□□ -1.76
TY2A-FP0CX61 VBA2YBR293W 1425 nt4.05□□□□□ -1.76
TY2A-FP0CX61 ATP16YDL004W 483 nt4.05□□□□□ -1.76
TY2A-FP0CX61 FCF1YDR339C 570 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YDR535CYDR535C 501 nt4.05□□□□□ -1.76
TY2A-FP0CX61 BNA6YFR047C 888 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YGL132WYGL132W 336 nt4.05□□□□□ -1.76
TY2A-FP0CX61 SPO11YHL022C 1197 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YHI9YHR029C 885 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YIL171WYIL171W 330 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YAL034C-BYAL034C-B 354 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YLR347W-AYLR347W-A 141 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YNL057WYNL057W 333 nt4.05□□□□□ -1.76
TY2A-FP0CX61 TRM112YNR046W 408 nt4.05□□□□□ -1.76
TY2A-FP0CX61 snR189snR189 189 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YPR174CYPR174C 666 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YBR242WYBR242W 717 nt4.05□□□□□ -1.76
TY2A-FP0CX61 RDH54YBR073W 2877 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YCR023CYCR023C 1836 nt4.05□□□□□ -1.76
TY2A-FP0CX61 YBR238CYBR238C 2196 nt4.04□□□□□ -1.76
TY2A-FP0CX61 MGA1YGR249W 1371 nt4.04□□□□□ -1.76
TY2A-FP0CX61 SPT14YPL175W 1359 nt4.04□□□□□ -1.76
TY2A-FP0CX61 GDH2YDL215C 3279 nt4.04□□□□□ -1.76
TY2A-FP0CX61 OCA4YCR095C 1089 nt4.04□□□□□ -1.76
TY2A-FP0CX61 LSM4YER112W 564 nt4.04□□□□□ -1.76
TY2A-FP0CX61 RAD27YKL113C 1149 nt4.04□□□□□ -1.76
TY2A-FP0CX61 SMD2YLR275W 333 nt4.04□□□□□ -1.76
TY2A-FP0CX61 URA5YML106W 681 nt4.04□□□□□ -1.76
TY2A-FP0CX61 CSM3YMR048W 954 nt4.04□□□□□ -1.76
TY2A-FP0CX61 YBL068W-AYBL068W-A 237 nt4.04□□□□□ -1.76
TY2A-FP0CX61 GRX5YPL059W 453 nt4.04□□□□□ -1.76
TY2A-FP0CX61 DIM1YPL266W 957 nt4.04□□□□□ -1.76
TY2A-FP0CX61 AZR1YGR224W 1842 nt4.04□□□□□ -1.76
TY2A-FP0CX61 NTH1YDR001C 2256 nt4.04□□□□□ -1.76
TY2A-FP0CX61 KRE28YDR532C 1158 nt4.03□□□□□ -1.76
TY2A-FP0CX61 RSM25YIL093C 795 nt4.03□□□□□ -1.76
TY2A-FP0CX61 YMR310CYMR310C 954 nt4.03□□□□□ -1.76
TY2A-FP0CX61 TAZ1YPR140W 1146 nt4.03□□□□□ -1.76
TY2A-FP0CX61 RAD54YGL163C 2697 nt4.03□□□□□ -1.76
TY2A-FP0CX61 TRF5YNL299W 1929 nt4.03□□□□□ -1.76
TY2A-FP0CX61 TRM11YOL124C 1302 nt4.02□□□□□ -1.77
TY2A-FP0CX61 LAS1YKR063C 1509 nt4.02□□□□□ -1.77
TY2A-FP0CX61 DSE1YER124C 1722 nt4.02□□□□□ -1.77
TY2A-FP0CX61 RPS25AYGR027C 327 nt4.02□□□□□ -1.77
TY2A-FP0CX61 PET130YJL023C 1044 nt4.02□□□□□ -1.77
TY2A-FP0CX61 MOH1YBL049W 417 nt4.02□□□□□ -1.77
TY2A-FP0CX61 END3YNL084C 1050 nt4.02□□□□□ -1.77
TY2A-FP0CX61 MRPL17YNL252C 846 nt4.02□□□□□ -1.77
TY2A-FP0CX61 FIG1YBR040W 897 nt4.02□□□□□ -1.77
TY2A-FP0CX61 IDI1YPL117C 867 nt4.02□□□□□ -1.77
TY2A-FP0CX61 POP4YBR257W 840 nt4.02□□□□□ -1.77
TY2A-FP0CX61 FLO8YER109C 2400 nt4.02□□□□□ -1.77
TY2A-FP0CX61 YPL109CYPL109C 1974 nt4.02□□□□□ -1.77
TY2A-FP0CX61 PRP28YDR243C 1767 nt4.02□□□□□ -1.77
TY2A-FP0CX61 OLE1YGL055W 1533 nt4.01□□□□□ -1.77
TY2A-FP0CX61 GRC3YLL035W 1899 nt4.01□□□□□ -1.77
TY2A-FP0CX61 SPI1YER150W 447 nt4.01□□□□□ -1.77
TY2A-FP0CX61 YFL012WYFL012W 447 nt4.01□□□□□ -1.77
TY2A-FP0CX61 RPL24AYGL031C 468 nt4.01□□□□□ -1.77
TY2A-FP0CX61 COX6YHR051W 447 nt4.01□□□□□ -1.77
TY2A-FP0CX61 YAR075WYAR075W 474 nt4.01□□□□□ -1.77
TY2A-FP0CX61 SWC7YLR385C 399 nt4.01□□□□□ -1.77
TY2A-FP0CX61 YML031C-AYML031C-A 336 nt4.01□□□□□ -1.77
TY2A-FP0CX61 TOM7YNL070W 183 nt4.01□□□□□ -1.77
TY2A-FP0CX61 IST1YNL265C 897 nt4.01□□□□□ -1.77
TY2A-FP0CX61 YNL320WYNL320W 855 nt4.01□□□□□ -1.77
TY2A-FP0CX61 HUA2YOR284W 732 nt4.01□□□□□ -1.77
TY2A-FP0CX61 YPL025CYPL025C 558 nt4.01□□□□□ -1.77
TY2A-FP0CX61 SAG1YJR004C 1953 nt4.01□□□□□ -1.77
TY2A-FP0CX61 FAA1YOR317W 2103 nt4.01□□□□□ -1.77
TY2A-FP0CX61 TRM44YPL030W 1704 nt4.01□□□□□ -1.77
TY2A-FP0CX61 RNA14YMR061W 2034 nt4□□□□□ -1.77
TY2A-FP0CX61 ISW2YOR304W 3363 nt4□□□□□ -1.77
TY2A-FP0CX61 LYS2YBR115C 4179 nt4□□□□□ -1.77
TY2A-FP0CX61 RPP1AYDL081C 321 nt4□□□□□ -1.77
TY2A-FP0CX61 API2YDR525W 330 nt4□□□□□ -1.77
TY2A-FP0CX61 EFB1YAL003W 621 nt4□□□□□ -1.77
TY2A-FP0CX61 RDN5-1RDN5-1 121 nt4□□□□□ -1.77
TY2A-FP0CX61 RDN5-6RDN5-6 121 nt4□□□□□ -1.77
TY2A-FP0CX61 YLR428CYLR428C 345 nt4□□□□□ -1.77
TY2A-FP0CX61 RPL15BYMR121C 615 nt4□□□□□ -1.77
TY2A-FP0CX61 DLT1YMR126C 1029 nt4□□□□□ -1.77
TY2A-FP0CX61 YNL303WYNL303W 348 nt4□□□□□ -1.77
TY2A-FP0CX61 YPR078CYPR078C 1119 nt4□□□□□ -1.77
TY2A-FP0CX61 FDC1YDR539W 1512 nt4□□□□□ -1.77
TY2A-FP0CX61 YML020WYML020W 1995 nt4□□□□□ -1.77
TY2A-FP0CX61 UBP12YJL197W 3765 nt4□□□□□ -1.77
TY2A-FP0CX61 EPO1YMR124W 2832 nt3.99□□□□□ -1.77
TY2A-FP0CX61 RIM21YNL294C 1602 nt3.99□□□□□ -1.77
TY2A-FP0CX61 ACK1YDL203C 1872 nt3.99□□□□□ -1.77
TY2A-FP0CX61 RPG1YBR079C 2895 nt3.99□□□□□ -1.77
TY2A-FP0CX61 THI13YDL244W 1023 nt3.99□□□□□ -1.77
TY2A-FP0CX61 YGR266WYGR266W 2106 nt3.99□□□□□ -1.77
TY2A-FP0CX61 YHL034W-AYHL034W-A 462 nt3.99□□□□□ -1.77
TY2A-FP0CX61 THI11YJR156C 1023 nt3.99□□□□□ -1.77
TY2A-FP0CX61 SSO2YMR183C 888 nt3.99□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 49.2 ms