Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NDUFA1O15239 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.74□□□□□ -0.05
NDUFA1O15239 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 AL033527.3-201ENST00000566366 1196 ntBASIC14.74□□□□□ -0.05
NDUFA1O15239 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
NDUFA1O15239 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.74□□□□□ -0.05
NDUFA1O15239 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NDUFA1O15239 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NDUFA1O15239 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NDUFA1O15239 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.73□□□□□ -0.05
NDUFA1O15239 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.73□□□□□ -0.05
NDUFA1O15239 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA1O15239 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA1O15239 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.73□□□□□ -0.05
NDUFA1O15239 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
NDUFA1O15239 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA1O15239 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NDUFA1O15239 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NDUFA1O15239 KRT8P33-201ENST00000508125 1423 ntBASIC14.73□□□□□ -0.05
NDUFA1O15239 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.73□□□□□ -0.05
NDUFA1O15239 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NDUFA1O15239 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NDUFA1O15239 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA1O15239 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NDUFA1O15239 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.72□□□□□ -0.05
NDUFA1O15239 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA1O15239 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.72□□□□□ -0.05
NDUFA1O15239 SNX5-217ENST00000606557 1087 ntBASIC14.72□□□□□ -0.05
NDUFA1O15239 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NDUFA1O15239 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.72□□□□□ -0.05
NDUFA1O15239 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NDUFA1O15239 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.71□□□□□ -0.05
NDUFA1O15239 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 AC144652.1-201ENST00000609974 1624 ntBASIC14.71□□□□□ -0.05
NDUFA1O15239 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
NDUFA1O15239 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.71□□□□□ -0.05
NDUFA1O15239 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.71□□□□□ -0.05
NDUFA1O15239 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.71□□□□□ -0.05
NDUFA1O15239 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.71□□□□□ -0.05
NDUFA1O15239 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.71□□□□□ -0.05
NDUFA1O15239 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NDUFA1O15239 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA1O15239 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NDUFA1O15239 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
NDUFA1O15239 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA1O15239 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.7□□□□□ -0.06
NDUFA1O15239 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 AL031848.2-201ENST00000607670 837 ntBASIC14.7□□□□□ -0.06
NDUFA1O15239 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.7□□□□□ -0.06
NDUFA1O15239 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NDUFA1O15239 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NDUFA1O15239 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NDUFA1O15239 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NDUFA1O15239 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA1O15239 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NDUFA1O15239 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NDUFA1O15239 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.69□□□□□ -0.06
NDUFA1O15239 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NDUFA1O15239 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NDUFA1O15239 AC103724.3-201ENST00000564481 992 ntBASIC14.69□□□□□ -0.06
NDUFA1O15239 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms