Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 DGA1YOR245C 1257 nt4.01□□□□□ -1.77
TY1B-HO13535 MRPL37YBR268W 318 nt4.01□□□□□ -1.77
TY1B-HO13535 YDR061WYDR061W 1620 nt4□□□□□ -1.77
TY1B-HO13535 YIL102C-AYIL102C-A 228 nt4□□□□□ -1.77
TY1B-HO13535 MIC27YNL100W 705 nt4□□□□□ -1.77
TY1B-HO13535 CDC6YJL194W 1542 nt4□□□□□ -1.77
TY1B-HO13535 PMR1YGL167C 2853 nt4□□□□□ -1.77
TY1B-HO13535 RRD2YPL152W 1077 nt3.99□□□□□ -1.77
TY1B-HO13535 RSA1YPL193W 1146 nt3.99□□□□□ -1.77
TY1B-HO13535 PUT3YKL015W 2940 nt3.99□□□□□ -1.77
TY1B-HO13535 NPR3YHL023C 3441 nt3.99□□□□□ -1.77
TY1B-HO13535 MCA1YOR197W 1299 nt3.99□□□□□ -1.77
TY1B-HO13535 ELP3YPL086C 1674 nt3.98□□□□□ -1.77
TY1B-HO13535 PSY1YKL076C 384 nt3.98□□□□□ -1.77
TY1B-HO13535 YMR030W-AYMR030W-A 291 nt3.98□□□□□ -1.77
TY1B-HO13535 END3YNL084C 1050 nt3.98□□□□□ -1.77
TY1B-HO13535 HST2YPL015C 1074 nt3.98□□□□□ -1.77
TY1B-HO13535 SEO1YAL067C 1782 nt3.98□□□□□ -1.77
TY1B-HO13535 TCO89YPL180W 2400 nt3.97□□□□□ -1.77
TY1B-HO13535 MAK32YCR019W 1092 nt3.97□□□□□ -1.77
TY1B-HO13535 YCR045W-AYCR045W-A 351 nt3.97□□□□□ -1.77
TY1B-HO13535 YBR242WYBR242W 717 nt3.97□□□□□ -1.77
TY1B-HO13535 APL5YPL195W 2799 nt3.96□□□□□ -1.77
TY1B-HO13535 MSB1YOR188W 3414 nt3.96□□□□□ -1.78
TY1B-HO13535 AXL1YPR122W 3627 nt3.96□□□□□ -1.78
TY1B-HO13535 IRC20YLR247C 4671 nt3.96□□□□□ -1.78
TY1B-HO13535 RPB8YOR224C 441 nt3.96□□□□□ -1.78
TY1B-HO13535 DIM1YPL266W 957 nt3.96□□□□□ -1.78
TY1B-HO13535 SWP1YMR149W 861 nt3.95□□□□□ -1.78
TY1B-HO13535 GAT2YMR136W 1683 nt3.95□□□□□ -1.78
TY1B-HO13535 BET3YKR068C 582 nt3.94□□□□□ -1.78
TY1B-HO13535 ECM2YBR065C 1095 nt3.94□□□□□ -1.78
TY1B-HO13535 YHR080CYHR080C 4038 nt3.94□□□□□ -1.78
TY1B-HO13535 INP52YNL106C 3552 nt3.94□□□□□ -1.78
TY1B-HO13535 ORC6YHR118C 1308 nt3.94□□□□□ -1.78
TY1B-HO13535 RFT1YBL020W 1725 nt3.94□□□□□ -1.78
TY1B-HO13535 MDM38YOL027C 1722 nt3.94□□□□□ -1.78
TY1B-HO13535 GRE3YHR104W 984 nt3.94□□□□□ -1.78
TY1B-HO13535 SGS1YMR190C 4344 nt3.93□□□□□ -1.78
TY1B-HO13535 GIP3YPL137C 3831 nt3.93□□□□□ -1.78
TY1B-HO13535 CAF130YGR134W 3369 nt3.93□□□□□ -1.78
TY1B-HO13535 YDL241WYDL241W 372 nt3.93□□□□□ -1.78
TY1B-HO13535 JJJ3YJR097W 519 nt3.93□□□□□ -1.78
TY1B-HO13535 ACT1YFL039C 1128 nt3.92□□□□□ -1.78
TY1B-HO13535 AYR1YIL124W 894 nt3.92□□□□□ -1.78
TY1B-HO13535 ATP12YJL180C 978 nt3.92□□□□□ -1.78
TY1B-HO13535 PPA2YMR267W 933 nt3.92□□□□□ -1.78
TY1B-HO13535 HUL4YJR036C 2679 nt3.92□□□□□ -1.78
TY1B-HO13535 YHR214C-EYHR214C-E 300 nt3.91□□□□□ -1.78
TY1B-HO13535 YAR070CYAR070C 300 nt3.91□□□□□ -1.78
TY1B-HO13535 DDP1YOR163W 567 nt3.91□□□□□ -1.78
TY1B-HO13535 ECM7YLR443W 1347 nt3.91□□□□□ -1.78
TY1B-HO13535 PHO91YNR013C 2685 nt3.91□□□□□ -1.78
TY1B-HO13535 SPT4YGR063C 309 nt3.91□□□□□ -1.78
TY1B-HO13535 YIL156W-BYIL156W-B 222 nt3.91□□□□□ -1.78
TY1B-HO13535 BOI1YBL085W 2943 nt3.91□□□□□ -1.78
TY1B-HO13535 GRS2YPR081C 1857 nt3.91□□□□□ -1.78
TY1B-HO13535 VAC17YCL063W 1272 nt3.9□□□□□ -1.79
TY1B-HO13535 YMR187CYMR187C 1296 nt3.9□□□□□ -1.79
TY1B-HO13535 INP53YOR109W 3324 nt3.9□□□□□ -1.79
TY1B-HO13535 SPA2YLL021W 4401 nt3.9□□□□□ -1.79
TY1B-HO13535 FLO9YAL063C 3969 nt3.9□□□□□ -1.79
TY1B-HO13535 RAD55YDR076W 1221 nt3.89□□□□□ -1.79
TY1B-HO13535 YDR491CYDR491C 492 nt3.89□□□□□ -1.79
TY1B-HO13535 DSD1YGL196W 1287 nt3.89□□□□□ -1.79
TY1B-HO13535 OCA1YNL099C 717 nt3.89□□□□□ -1.79
TY1B-HO13535 DNF1YER166W 4716 nt3.89□□□□□ -1.79
TY1B-HO13535 GIP1YBR045C 1920 nt3.89□□□□□ -1.79
TY1B-HO13535 ATP7YKL016C 525 nt3.89□□□□□ -1.79
TY1B-HO13535 HAA1YPR008W 2085 nt3.88□□□□□ -1.79
TY1B-HO13535 EBS1YDR206W 2655 nt3.88□□□□□ -1.79
TY1B-HO13535 YGR121W-AYGR121W-A 216 nt3.88□□□□□ -1.79
TY1B-HO13535 ATG21YPL100W 1491 nt3.87□□□□□ -1.79
TY1B-HO13535 SNU23YDL098C 585 nt3.87□□□□□ -1.79
TY1B-HO13535 DAD4YDR320C-A 219 nt3.87□□□□□ -1.79
TY1B-HO13535 RPS24AYER074W 408 nt3.87□□□□□ -1.79
TY1B-HO13535 YJR037WYJR037W 384 nt3.87□□□□□ -1.79
TY1B-HO13535 IZH2YOL002C 954 nt3.87□□□□□ -1.79
TY1B-HO13535 RPO41YFL036W 4056 nt3.87□□□□□ -1.79
TY1B-HO13535 HER1YOR227W 3741 nt3.87□□□□□ -1.79
TY1B-HO13535 ATG1YGL180W 2694 nt3.87□□□□□ -1.79
TY1B-HO13535 RSM10YDR041W 612 nt3.86□□□□□ -1.79
TY1B-HO13535 YDR274CYDR274C 372 nt3.86□□□□□ -1.79
TY1B-HO13535 RRT13YER066W 558 nt3.86□□□□□ -1.79
TY1B-HO13535 MSH2YOL090W 2895 nt3.86□□□□□ -1.79
TY1B-HO13535 ATG13YPR185W 2217 nt3.86□□□□□ -1.79
TY1B-HO13535 YPT35YHR105W 645 nt3.86□□□□□ -1.79
TY1B-HO13535 YIP5YGL161C 933 nt3.85□□□□□ -1.79
TY1B-HO13535 YPL107WYPL107W 747 nt3.85□□□□□ -1.79
TY1B-HO13535 STB2YMR053C 2553 nt3.85□□□□□ -1.79
TY1B-HO13535 FKS3YMR306W 5358 nt3.85□□□□□ -1.79
TY1B-HO13535 SBE2YDR351W 2595 nt3.84□□□□□ -1.79
TY1B-HO13535 ULP1YPL020C 1866 nt3.84□□□□□ -1.79
TY1B-HO13535 ERG11YHR007C 1593 nt3.84□□□□□ -1.79
TY1B-HO13535 NCS2YNL119W 1482 nt3.84□□□□□ -1.79
TY1B-HO13535 YGL082WYGL082W 1146 nt3.84□□□□□ -1.79
TY1B-HO13535 TMN3YER113C 2121 nt3.84□□□□□ -1.79
TY1B-HO13535 FPK1YNR047W 2682 nt3.84□□□□□ -1.8
TY1B-HO13535 NAB3YPL190C 2409 nt3.84□□□□□ -1.8
TY1B-HO13535 YOR277CYOR277C 309 nt3.84□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 58.2 ms