Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC40.87■■■■■ 4.134e-8■■■■■ 30
PABPN1Q86U42 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC40.02■■■■■ 44e-8■■■■■ 30
PABPN1Q86U42 CD99-207ENST00000482293 466 ntTSL 239.5■■■■□ 3.914e-8■■■■■ 30
PABPN1Q86U42 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 537.71■■■■□ 3.634e-8■■■■■ 30
PABPN1Q86U42 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC37.01■■■■□ 3.524e-8■■■■■ 30
PABPN1Q86U42 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC34.45■■■■□ 3.114e-8■■■■■ 30
PABPN1Q86U42 CD99-211ENST00000623253 573 ntTSL 1 (best)34.36■■■■□ 3.094e-8■■■■■ 30
PABPN1Q86U42 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.014e-8■■■■■ 30
PABPN1Q86U42 MRPL28-206ENST00000450882 619 ntTSL 331.64■■■□□ 2.664e-8■■■■■ 30
PABPN1Q86U42 HOOK2-214ENST00000589915 264 ntTSL 228.69■■■□□ 2.184e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-215ENST00000496381 858 ntTSL 325.63■■□□□ 1.694e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-216ENST00000498525 777 ntTSL 525.31■■□□□ 1.644e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.414e-8■■■■■ 30
PABPN1Q86U42 ABCC3-205ENST00000503337 2277 ntTSL 1 (best)22.79■■□□□ 1.244e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC22.37■■□□□ 1.174e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-210ENST00000473997 1930 ntTSL 2 BASIC20.79■□□□□ 0.924e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC20.66■□□□□ 0.94e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-204ENST00000427097 974 ntTSL 518.9■□□□□ 0.624e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-213ENST00000482967 840 ntTSL 318.65■□□□□ 0.584e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-212ENST00000481964 945 ntTSL 518.65■□□□□ 0.584e-8■■■■■ 30
PABPN1Q86U42 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-8■■■■■ 30
PABPN1Q86U42 CLASRP-209ENST00000588016 967 ntTSL 217.5■□□□□ 0.394e-8■■■■■ 30
PABPN1Q86U42 ABCC3-203ENST00000502426 5326 ntTSL 217.45■□□□□ 0.384e-8■■■■■ 30
PABPN1Q86U42 ABCC3-207ENST00000505699 5271 ntTSL 217.38■□□□□ 0.374e-8■■■■■ 30
PABPN1Q86U42 CD99-201ENST00000381177 756 ntTSL 217.06■□□□□ 0.324e-8■■■■■ 30
PABPN1Q86U42 CDK5RAP1-207ENST00000461710 2650 ntTSL 216.86■□□□□ 0.294e-8■■■■■ 30
PABPN1Q86U42 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.231e-6■■■■■ 30
PABPN1Q86U42 VARS2-206ENST00000473916 2000 ntTSL 231.37■■■□□ 2.612e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-208ENST00000590994 883 ntTSL 529.43■■■□□ 2.37e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-206ENST00000587439 2758 ntTSL 226.3■■□□□ 1.87e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-205ENST00000585968 2762 ntTSL 1 (best)24.38■■□□□ 1.497e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-202ENST00000424522 4462 ntTSL 519.29■□□□□ 0.687e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.367e-7■■■■■ 29.9
PABPN1Q86U42 HAUS5-203ENST00000428854 4387 ntTSL 516.89■□□□□ 0.297e-7■■■■■ 29.9
PABPN1Q86U42 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC16.28■□□□□ 0.21e-14■■■■■ 29.9
PABPN1Q86U42 POLE-210ENST00000537064 8011 ntTSL 1 (best)14.15□□□□□ -0.141e-6■■■■■ 29.8
PABPN1Q86U42 COL27A1-205ENST00000485397 463 ntTSL 540.3■■■■■ 4.043e-11■■■■■ 29.8
PABPN1Q86U42 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.772e-8■■■■■ 29.7
PABPN1Q86U42 RNF216-201ENST00000389900 3104 ntTSL 1 (best)14.42□□□□□ -0.12e-8■■■■■ 29.7
PABPN1Q86U42 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.799e-7■■■■■ 29.6
PABPN1Q86U42 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.849e-7■■■■■ 29.6
PABPN1Q86U42 VARS-221ENST00000463184 619 ntTSL 241.71■■■■■ 4.277e-9■■■■■ 29.6
PABPN1Q86U42 POLE-206ENST00000534922 1660 ntTSL 334.73■■■■□ 3.157e-7■■■■■ 29.6
PABPN1Q86U42 MARCH6-214ENST00000606497 1334 ntTSL 418.38■□□□□ 0.531e-6■■■■■ 29.6
PABPN1Q86U42 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.081e-6■■■■■ 29.6
PABPN1Q86U42 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC30.12■■■□□ 2.412e-7■■■■■ 29.5
PABPN1Q86U42 COL7A1-209ENST00000474432 728 ntTSL 338.26■■■■□ 3.721e-9■■■■■ 29.5
PABPN1Q86U42 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)31.29■■■□□ 2.62e-7■■■■■ 29.4
PABPN1Q86U42 PSMC5-217ENST00000584536 804 ntTSL 524.87■■□□□ 1.574e-7■■■■■ 29.3
PABPN1Q86U42 PSMC5-204ENST00000579031 772 ntTSL 223.21■■□□□ 1.314e-7■■■■■ 29.3
PABPN1Q86U42 APOL1-203ENST00000397279 1564 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.69e-7■■■■■ 29.3
PABPN1Q86U42 POLE-221ENST00000544870 659 ntTSL 334.06■■■■□ 3.041e-6■■■■■ 29
PABPN1Q86U42 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.281e-6■■■■■ 29
PABPN1Q86U42 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC47.91■■■■■ 5.261e-6■■■■■ 29
PABPN1Q86U42 CARS2-206ENST00000481787 1223 ntTSL 535.45■■■■□ 3.271e-6■■■■■ 29
PABPN1Q86U42 CARS2-208ENST00000487253 844 ntTSL 533.78■■■■□ 31e-6■■■■■ 29
PABPN1Q86U42 CARS2-229ENST00000542774 647 ntTSL 233.58■■■□□ 2.971e-6■■■■■ 29
PABPN1Q86U42 CARS2-220ENST00000540006 1485 ntTSL 231.92■■■□□ 2.71e-6■■■■■ 29
PABPN1Q86U42 CARS2-210ENST00000535516 2313 ntTSL 527.31■■□□□ 1.961e-6■■■■■ 29
PABPN1Q86U42 CARS2-202ENST00000375781 2747 ntTSL 222.46■■□□□ 1.191e-6■■■■■ 29
PABPN1Q86U42 CARS2-217ENST00000537802 3225 ntTSL 220.46■□□□□ 0.871e-6■■■■■ 29
PABPN1Q86U42 CARS2-224ENST00000541239 3516 ntTSL 217.84■□□□□ 0.451e-6■■■■■ 29
PABPN1Q86U42 ANO9-202ENST00000524802 671 ntTSL 1 (best)29.63■■■□□ 2.338e-8■■■■■ 29
PABPN1Q86U42 MAP4K2-212ENST00000489952 1468 ntTSL 549.14■■■■■ 5.468e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-216ENST00000496861 1351 ntTSL 1 (best)48■■■■■ 5.278e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC47.97■■■■■ 5.278e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-203ENST00000424945 1175 ntTSL 543.21■■■■■ 4.518e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-210ENST00000470088 1805 ntTSL 541.82■■■■■ 4.298e-8■■■■■ 28.9
PABPN1Q86U42 MXD3-204ENST00000502529 440 ntTSL 340.65■■■■■ 4.18e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-207ENST00000498685 1392 ntTSL 235.17■■■■□ 3.228e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-205ENST00000361532 792 ntTSL 2 BASIC34.77■■■■□ 3.168e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC33.73■■■□□ 2.996e-15■■■■■ 28.9
PABPN1Q86U42 MXD3-209ENST00000513169 555 ntTSL 533.65■■■□□ 2.988e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-203ENST00000466860 1709 ntTSL 532.58■■■□□ 2.818e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-209ENST00000488627 1118 ntTSL 331.97■■■□□ 2.716e-15■■■■■ 28.9
PABPN1Q86U42 MAP4K2-204ENST00000433890 2410 ntTSL 531.9■■■□□ 2.78e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-206ENST00000361631 725 ntTSL 2 BASIC31.89■■■□□ 2.78e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-204ENST00000478299 595 ntTSL 230.63■■■□□ 2.498e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.468e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.158e-8■■■■■ 28.9
PABPN1Q86U42 MIIP-202ENST00000460823 955 ntTSL 527.94■■■□□ 2.068e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC27.66■■■□□ 2.028e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC27.16■■□□□ 1.948e-8■■■■■ 28.9
PABPN1Q86U42 CTDSP1-206ENST00000464255 926 ntTSL 526.93■■□□□ 1.96e-15■■■■■ 28.9
PABPN1Q86U42 NIT1-211ENST00000485594 1037 ntTSL 526.05■■□□□ 1.768e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.618e-8■■■■■ 28.9
PABPN1Q86U42 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC23.84■■□□□ 1.418e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-205ENST00000435926 3169 ntTSL 523.65■■□□□ 1.388e-8■■■■■ 28.9
PABPN1Q86U42 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.648e-8■■■■■ 28.9
PABPN1Q86U42 ENSA-209ENST00000369016 923 ntTSL 5 BASIC18.54■□□□□ 0.568e-8■■■■■ 28.9
PABPN1Q86U42 PSMC5-203ENST00000578570 1680 ntTSL 238.56■■■■□ 3.764e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC33.57■■■□□ 2.974e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC31.09■■■□□ 2.574e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.834e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC26.38■■□□□ 1.814e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-205ENST00000579147 2586 ntTSL 222.97■■□□□ 1.274e-7■■■■■ 28.9
PABPN1Q86U42 PSMC5-221ENST00000585242 1178 ntTSL 519.18■□□□□ 0.664e-7■■■■■ 28.9
PABPN1Q86U42 SPG7-218ENST00000568205 463 ntTSL 229.81■■■□□ 2.361e-11■■■■■ 28.8
PABPN1Q86U42 PIDD1-206ENST00000527812 481 ntTSL 333.41■■■□□ 2.942e-7■■■■■ 28.7
PABPN1Q86U42 MAMDC4-204ENST00000481327 380 ntTSL 343.94■■■■■ 4.629e-7■■■■■ 28.7
Retrieved 100 of 8,254 protein–RNA pairs in 36.1 ms