RNA–Protein interactions for RNA: ENST00000310144.10

PSMC5-201, Transcript of proteasome 26S subunit, ATPase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC5, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC5-201ENST00000310144 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.76
PSMC5-201ENST00000310144 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
PSMC5-201ENST00000310144 ABCC9O60706 1549 aa28.4■■■□□ 2.14
PSMC5-201ENST00000310144 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
PSMC5-201ENST00000310144 NACADO15069 1562 aa27.06■■□□□ 1.92
PSMC5-201ENST00000310144 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
PSMC5-201ENST00000310144 ZCCHC6Q5VYS8 1495 aaKnown RBP26.86■■□□□ 1.89
PSMC5-201ENST00000310144 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
PSMC5-201ENST00000310144 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
PSMC5-201ENST00000310144 MYO15BQ96JP2 1530 aa26.77■■□□□ 1.88
PSMC5-201ENST00000310144 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
PSMC5-201ENST00000310144 PABPN1Q86U42 306 aaKnown RBP eCLIP26.47■■□□□ 1.834e-7■■■■■ 28.9
PSMC5-201ENST00000310144 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
PSMC5-201ENST00000310144 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
PSMC5-201ENST00000310144 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
PSMC5-201ENST00000310144 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
PSMC5-201ENST00000310144 CC2D2AQ9P2K1 1620 aa25.71■■□□□ 1.71
PSMC5-201ENST00000310144 CECR2Q9BXF3 1484 aa25.56■■□□□ 1.68
PSMC5-201ENST00000310144 SMARCA4P51532 1647 aa25.14■■□□□ 1.62
PSMC5-201ENST00000310144 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
PSMC5-201ENST00000310144 ATAD2BQ9ULI0 1458 aa24.98■■□□□ 1.59
PSMC5-201ENST00000310144 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
PSMC5-201ENST00000310144 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
PSMC5-201ENST00000310144 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
PSMC5-201ENST00000310144 DNAJC5Q9H3Z4 198 aa24.9■■□□□ 1.58
PSMC5-201ENST00000310144 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
PSMC5-201ENST00000310144 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
PSMC5-201ENST00000310144 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
PSMC5-201ENST00000310144 WIZO95785 1651 aa24.71■■□□□ 1.55
PSMC5-201ENST00000310144 CUX2O14529 1486 aa24.58■■□□□ 1.53
PSMC5-201ENST00000310144 NESP48681 1621 aa24.57■■□□□ 1.52
PSMC5-201ENST00000310144 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
PSMC5-201ENST00000310144 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
PSMC5-201ENST00000310144 LAMC3Q9Y6N6 1575 aa24.37■■□□□ 1.49
PSMC5-201ENST00000310144 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
PSMC5-201ENST00000310144 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
PSMC5-201ENST00000310144 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
PSMC5-201ENST00000310144 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
PSMC5-201ENST00000310144 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
PSMC5-201ENST00000310144 CFTRP13569 1480 aa24.05■■□□□ 1.44
PSMC5-201ENST00000310144 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
PSMC5-201ENST00000310144 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
PSMC5-201ENST00000310144 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
PSMC5-201ENST00000310144 MRC2Q9UBG0 1479 aa23.98■■□□□ 1.43
PSMC5-201ENST00000310144 CEP164Q9UPV0 1460 aa23.97■■□□□ 1.43
PSMC5-201ENST00000310144 WDR62O43379 1518 aa23.95■■□□□ 1.42
PSMC5-201ENST00000310144 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
PSMC5-201ENST00000310144 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
PSMC5-201ENST00000310144 TRIM41Q8WV44 630 aa23.64■■□□□ 1.37
PSMC5-201ENST00000310144 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
PSMC5-201ENST00000310144 DNMBPQ6XZF7 1577 aa23.56■■□□□ 1.36
PSMC5-201ENST00000310144 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
PSMC5-201ENST00000310144 ABCC8Q09428 1581 aa23.45■■□□□ 1.35
PSMC5-201ENST00000310144 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
PSMC5-201ENST00000310144 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
PSMC5-201ENST00000310144 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
PSMC5-201ENST00000310144 CUX1P39880 1505 aa23.4■■□□□ 1.34
PSMC5-201ENST00000310144 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.34
PSMC5-201ENST00000310144 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
PSMC5-201ENST00000310144 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
PSMC5-201ENST00000310144 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
PSMC5-201ENST00000310144 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.313e-7■■■■■ 33.1
PSMC5-201ENST00000310144 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
PSMC5-201ENST00000310144 SOGA1O94964 1423 aa23.22■■□□□ 1.31
PSMC5-201ENST00000310144 CHD1O14646 1710 aa23.2■■□□□ 1.3
PSMC5-201ENST00000310144 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
PSMC5-201ENST00000310144 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
PSMC5-201ENST00000310144 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
PSMC5-201ENST00000310144 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
PSMC5-201ENST00000310144 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
PSMC5-201ENST00000310144 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
PSMC5-201ENST00000310144 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
PSMC5-201ENST00000310144 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
PSMC5-201ENST00000310144 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
PSMC5-201ENST00000310144 SNAPC4Q5SXM2 1469 aa23.06■■□□□ 1.28
PSMC5-201ENST00000310144 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
PSMC5-201ENST00000310144 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
PSMC5-201ENST00000310144 ARHGEF11O15085 1522 aa23■■□□□ 1.27
PSMC5-201ENST00000310144 GRIN2BQ13224 1484 aa22.98■■□□□ 1.27
PSMC5-201ENST00000310144 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
PSMC5-201ENST00000310144 FBLN2P98095 1184 aa22.94■■□□□ 1.26
PSMC5-201ENST00000310144 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
PSMC5-201ENST00000310144 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
PSMC5-201ENST00000310144 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
PSMC5-201ENST00000310144 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
PSMC5-201ENST00000310144 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
PSMC5-201ENST00000310144 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
PSMC5-201ENST00000310144 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
PSMC5-201ENST00000310144 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
PSMC5-201ENST00000310144 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
PSMC5-201ENST00000310144 CEP170Q5SW79 1584 aa22.71■■□□□ 1.23
PSMC5-201ENST00000310144 TRHP20396 242 aaPredicted RBP22.7■■□□□ 1.22
PSMC5-201ENST00000310144 FHAD1B1AJZ9 1412 aa22.67■■□□□ 1.22
PSMC5-201ENST00000310144 NUP160Q12769 1436 aa22.62■■□□□ 1.21
PSMC5-201ENST00000310144 ERCC6L2Q5T890 1561 aa22.6■■□□□ 1.21
PSMC5-201ENST00000310144 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
PSMC5-201ENST00000310144 SHROOM2Q13796 1616 aa22.55■■□□□ 1.2
PSMC5-201ENST00000310144 CUL7Q14999 1698 aa22.55■■□□□ 1.2
PSMC5-201ENST00000310144 RUSC2Q8N2Y8 1516 aa22.52■■□□□ 1.2
PSMC5-201ENST00000310144 IGF1RP08069 1367 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms