Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 LSC2YGR244C 1284 nt10.36□□□□□ -0.75
DDC1Q08949 RPS14BYJL191W 417 nt10.36□□□□□ -0.75
DDC1Q08949 CLB6YGR109C 1143 nt10.34□□□□□ -0.75
DDC1Q08949 HIP1YGR191W 1812 nt10.34□□□□□ -0.75
DDC1Q08949 PRO1YDR300C 1287 nt10.33□□□□□ -0.76
DDC1Q08949 YML089CYML089C 369 nt10.33□□□□□ -0.76
DDC1Q08949 YMR226CYMR226C 804 nt10.33□□□□□ -0.76
DDC1Q08949 ARP6YLR085C 1317 nt10.33□□□□□ -0.76
DDC1Q08949 UTH1YKR042W 1098 nt10.32□□□□□ -0.76
DDC1Q08949 PEX2YJL210W 816 nt10.31□□□□□ -0.76
DDC1Q08949 RTN2YDL204W 1182 nt10.29□□□□□ -0.76
DDC1Q08949 TIF6YPR016C 738 nt10.27□□□□□ -0.77
DDC1Q08949 ATG15YCR068W 1563 nt10.26□□□□□ -0.77
DDC1Q08949 YLR111WYLR111W 333 nt10.25□□□□□ -0.77
DDC1Q08949 NRT1YOR071C 1797 nt10.24□□□□□ -0.77
DDC1Q08949 SDH5YOL071W 489 nt10.24□□□□□ -0.77
DDC1Q08949 PLB1YMR008C 1995 nt10.23□□□□□ -0.77
DDC1Q08949 MET28YIR017C 564 nt10.23□□□□□ -0.77
DDC1Q08949 GAP1YKR039W 1809 nt10.22□□□□□ -0.77
DDC1Q08949 YKR005CYKR005C 1578 nt10.22□□□□□ -0.77
DDC1Q08949 RAD23YEL037C 1197 nt10.21□□□□□ -0.77
DDC1Q08949 RPM1RPM1 483 nt10.21□□□□□ -0.77
DDC1Q08949 TSC10YBR265W 963 nt10.21□□□□□ -0.77
DDC1Q08949 HSP60YLR259C 1719 nt10.21□□□□□ -0.78
DDC1Q08949 YGR259CYGR259C 441 nt10.19□□□□□ -0.78
DDC1Q08949 YGR012WYGR012W 1182 nt10.18□□□□□ -0.78
DDC1Q08949 CAB5YDR196C 726 nt10.16□□□□□ -0.78
DDC1Q08949 YLR437C-AYLR437C-A 228 nt10.15□□□□□ -0.78
DDC1Q08949 PRP4YPR178W 1398 nt10.14□□□□□ -0.79
DDC1Q08949 YLR279WYLR279W 390 nt10.14□□□□□ -0.79
DDC1Q08949 SAM1YLR180W 1149 nt10.13□□□□□ -0.79
DDC1Q08949 FIT3YOR383C 615 nt10.13□□□□□ -0.79
DDC1Q08949 RIB3YDR487C 627 nt10.1□□□□□ -0.79
DDC1Q08949 DIF1YLR437C 402 nt10.1□□□□□ -0.79
DDC1Q08949 UTR1YJR049C 1593 nt10.09□□□□□ -0.79
DDC1Q08949 MSB4YOL112W 1479 nt10.09□□□□□ -0.79
DDC1Q08949 DPS1YLL018C 1674 nt10.09□□□□□ -0.79
DDC1Q08949 BMT6YLR063W 1098 nt10.05□□□□□ -0.8
DDC1Q08949 YAR028WYAR028W 705 nt10.05□□□□□ -0.8
DDC1Q08949 BOR1YNL275W 1731 nt10.02□□□□□ -0.8
DDC1Q08949 MTG2YHR168W 1557 nt10.01□□□□□ -0.81
DDC1Q08949 ZTA1YBR046C 1005 nt10.01□□□□□ -0.81
DDC1Q08949 ALP1YNL270C 1722 nt10□□□□□ -0.81
DDC1Q08949 IRC24YIR036C 792 nt9.99□□□□□ -0.81
DDC1Q08949 YPL222C-AYPL222C-A 246 nt9.99□□□□□ -0.81
DDC1Q08949 AKR2YOR034C 2250 nt9.97□□□□□ -0.81
DDC1Q08949 PRM5YIL117C 957 nt9.97□□□□□ -0.81
DDC1Q08949 SNF1YDR477W 1902 nt9.94□□□□□ -0.82
DDC1Q08949 SAM35YHR083W 990 nt9.94□□□□□ -0.82
DDC1Q08949 AAC1YMR056C 930 nt9.93□□□□□ -0.82
DDC1Q08949 GND1YHR183W 1470 nt9.92□□□□□ -0.82
DDC1Q08949 LOT5YKL183W 921 nt9.9□□□□□ -0.82
DDC1Q08949 SED1YDR077W 1017 nt9.89□□□□□ -0.83
DDC1Q08949 YPI1YFR003C 468 nt9.88□□□□□ -0.83
DDC1Q08949 ADH1YOL086C 1047 nt9.88□□□□□ -0.83
DDC1Q08949 FCY21YER060W 1587 nt9.88□□□□□ -0.83
DDC1Q08949 YER190C-AYER190C-A 576 nt9.87□□□□□ -0.83
DDC1Q08949 YGR296C-AYGR296C-A 576 nt9.87□□□□□ -0.83
DDC1Q08949 YML133W-AYML133W-A 576 nt9.87□□□□□ -0.83
DDC1Q08949 YNL339W-AYNL339W-A 576 nt9.87□□□□□ -0.83
DDC1Q08949 YPL283W-AYPL283W-A 576 nt9.87□□□□□ -0.83
DDC1Q08949 MCH5YOR306C 1566 nt9.87□□□□□ -0.83
DDC1Q08949 RAD51YER095W 1203 nt9.86□□□□□ -0.83
DDC1Q08949 FUN14YAL008W 597 nt9.84□□□□□ -0.83
DDC1Q08949 YJL195CYJL195C 702 nt9.84□□□□□ -0.83
DDC1Q08949 DBP1YPL119C 1854 nt9.84□□□□□ -0.83
DDC1Q08949 SMM1YNR015W 1155 nt9.83□□□□□ -0.84
DDC1Q08949 YNR029CYNR029C 1290 nt9.83□□□□□ -0.84
DDC1Q08949 ALD4YOR374W 1560 nt9.83□□□□□ -0.84
DDC1Q08949 YLR349WYLR349W 507 nt9.82□□□□□ -0.84
DDC1Q08949 LIP1YMR298W 453 nt9.82□□□□□ -0.84
DDC1Q08949 STE4YOR212W 1272 nt9.81□□□□□ -0.84
DDC1Q08949 UGA4YDL210W 1716 nt9.81□□□□□ -0.84
DDC1Q08949 APT2YDR441C 546 nt9.8□□□□□ -0.84
DDC1Q08949 HIF1YLL022C 1158 nt9.79□□□□□ -0.84
DDC1Q08949 YPL251WYPL251W 303 nt9.78□□□□□ -0.84
DDC1Q08949 YBL086CYBL086C 1401 nt9.78□□□□□ -0.84
DDC1Q08949 HXT1YHR094C 1713 nt9.77□□□□□ -0.85
DDC1Q08949 BIO5YNR056C 1686 nt9.77□□□□□ -0.85
DDC1Q08949 PRY1YJL079C 900 nt9.76□□□□□ -0.85
DDC1Q08949 LSB3YFR024C-A 1380 nt9.75□□□□□ -0.85
DDC1Q08949 LEU9YOR108W 1815 nt9.75□□□□□ -0.85
DDC1Q08949 HXT12YIL170W 1374 nt9.73□□□□□ -0.85
DDC1Q08949 RIB2YOL066C 1776 nt9.71□□□□□ -0.85
DDC1Q08949 YEL008WYEL008W 381 nt9.71□□□□□ -0.86
DDC1Q08949 BRR1YPR057W 1026 nt9.71□□□□□ -0.86
DDC1Q08949 ALG12YNR030W 1656 nt9.69□□□□□ -0.86
DDC1Q08949 MEP3YPR138C 1470 nt9.69□□□□□ -0.86
DDC1Q08949 YMR103CYMR103C 363 nt9.67□□□□□ -0.86
DDC1Q08949 ADH7YCR105W 1086 nt9.66□□□□□ -0.86
DDC1Q08949 TOA2YKL058W 369 nt9.66□□□□□ -0.86
DDC1Q08949 VRG4YGL225W 1014 nt9.65□□□□□ -0.86
DDC1Q08949 SHY1YGR112W 1170 nt9.65□□□□□ -0.86
DDC1Q08949 CSM1YCR086W 573 nt9.64□□□□□ -0.87
DDC1Q08949 UFO1YML088W 2007 nt9.64□□□□□ -0.87
DDC1Q08949 YJL055WYJL055W 738 nt9.63□□□□□ -0.87
DDC1Q08949 TRT2tT(CGU)K 72 nt9.62□□□□□ -0.87
DDC1Q08949 PAU15YIR041W 375 nt9.62□□□□□ -0.87
DDC1Q08949 GPN2YOR262W 1044 nt9.61□□□□□ -0.87
DDC1Q08949 GND2YGR256W 1479 nt9.6□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 70.8 ms