Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 TSC10YBR265W 963 nt12.12□□□□□ -0.47
BDF2Q07442 FUN14YAL008W 597 nt12.11□□□□□ -0.47
BDF2Q07442 TIR3YIL011W 810 nt12.1□□□□□ -0.47
BDF2Q07442 TOM6YOR045W 186 nt12.1□□□□□ -0.47
BDF2Q07442 PAU15YIR041W 375 nt12.08□□□□□ -0.48
BDF2Q07442 NBP35YGL091C 987 nt12.07□□□□□ -0.48
BDF2Q07442 YJL195CYJL195C 702 nt12.07□□□□□ -0.48
BDF2Q07442 YLR279WYLR279W 390 nt12.07□□□□□ -0.48
BDF2Q07442 HIP1YGR191W 1812 nt12.07□□□□□ -0.48
BDF2Q07442 PEX2YJL210W 816 nt12.06□□□□□ -0.48
BDF2Q07442 YFL054CYFL054C 1941 nt12.04□□□□□ -0.48
BDF2Q07442 NRT1YOR071C 1797 nt12.04□□□□□ -0.48
BDF2Q07442 CCA1YER168C 1641 nt12.04□□□□□ -0.48
BDF2Q07442 POM34YLR018C 900 nt12.01□□□□□ -0.49
BDF2Q07442 YML089CYML089C 369 nt11.97□□□□□ -0.49
BDF2Q07442 ADH1YOL086C 1047 nt11.97□□□□□ -0.49
BDF2Q07442 MET28YIR017C 564 nt11.95□□□□□ -0.5
BDF2Q07442 PRO1YDR300C 1287 nt11.92□□□□□ -0.5
BDF2Q07442 GPN2YOR262W 1044 nt11.92□□□□□ -0.5
BDF2Q07442 TIF6YPR016C 738 nt11.92□□□□□ -0.5
BDF2Q07442 MSB4YOL112W 1479 nt11.91□□□□□ -0.5
BDF2Q07442 YPL222C-AYPL222C-A 246 nt11.91□□□□□ -0.5
BDF2Q07442 YPI1YFR003C 468 nt11.9□□□□□ -0.5
BDF2Q07442 LSC2YGR244C 1284 nt11.9□□□□□ -0.5
BDF2Q07442 YEL008WYEL008W 381 nt11.88□□□□□ -0.51
BDF2Q07442 ATG15YCR068W 1563 nt11.88□□□□□ -0.51
BDF2Q07442 DUS1YML080W 1272 nt11.87□□□□□ -0.51
BDF2Q07442 AQY2YLL052C 450 nt11.86□□□□□ -0.51
BDF2Q07442 CPD1YGR247W 720 nt11.85□□□□□ -0.51
BDF2Q07442 STR3YGL184C 1398 nt11.84□□□□□ -0.51
BDF2Q07442 ESS1YJR017C 513 nt11.84□□□□□ -0.51
BDF2Q07442 FIT3YOR383C 615 nt11.84□□□□□ -0.51
BDF2Q07442 tS(GCU)LtS(GCU)L 80 nt11.83□□□□□ -0.52
BDF2Q07442 LOT5YKL183W 921 nt11.81□□□□□ -0.52
BDF2Q07442 SWE1YJL187C 2460 nt11.81□□□□□ -0.52
BDF2Q07442 GND1YHR183W 1470 nt11.8□□□□□ -0.52
BDF2Q07442 AAC1YMR056C 930 nt11.79□□□□□ -0.52
BDF2Q07442 YJL225CYJL225C 5277 nt11.79□□□□□ -0.52
BDF2Q07442 RDN18-1RDN18-1 1800 nt11.77□□□□□ -0.52
BDF2Q07442 RDN18-2RDN18-2 1800 nt11.77□□□□□ -0.52
BDF2Q07442 ARP6YLR085C 1317 nt11.71□□□□□ -0.53
BDF2Q07442 YCL074WYCL074W 927 nt11.7□□□□□ -0.54
BDF2Q07442 APT2YDR441C 546 nt11.7□□□□□ -0.54
BDF2Q07442 GAP1YKR039W 1809 nt11.69□□□□□ -0.54
BDF2Q07442 NAP1YKR048C 1254 nt11.66□□□□□ -0.54
BDF2Q07442 SEN2YLR105C 1134 nt11.66□□□□□ -0.54
BDF2Q07442 SMM1YNR015W 1155 nt11.64□□□□□ -0.55
BDF2Q07442 PUP1YOR157C 786 nt11.64□□□□□ -0.55
BDF2Q07442 ALP1YNL270C 1722 nt11.61□□□□□ -0.55
BDF2Q07442 LSB3YFR024C-A 1380 nt11.6□□□□□ -0.55
BDF2Q07442 ZTA1YBR046C 1005 nt11.6□□□□□ -0.55
BDF2Q07442 YAR028WYAR028W 705 nt11.59□□□□□ -0.55
BDF2Q07442 NME1NME1 340 nt11.59□□□□□ -0.55
BDF2Q07442 UME6YDR207C 2511 nt11.59□□□□□ -0.55
BDF2Q07442 RIB2YOL066C 1776 nt11.59□□□□□ -0.55
BDF2Q07442 BOR1YNL275W 1731 nt11.58□□□□□ -0.56
BDF2Q07442 AKR2YOR034C 2250 nt11.56□□□□□ -0.56
BDF2Q07442 DIF1YLR437C 402 nt11.55□□□□□ -0.56
BDF2Q07442 PLB1YMR008C 1995 nt11.55□□□□□ -0.56
BDF2Q07442 FCY21YER060W 1587 nt11.54□□□□□ -0.56
BDF2Q07442 MTG2YHR168W 1557 nt11.54□□□□□ -0.56
BDF2Q07442 RTN2YDL204W 1182 nt11.54□□□□□ -0.56
BDF2Q07442 PGC1YPL206C 966 nt11.54□□□□□ -0.56
BDF2Q07442 PAU5YFL020C 369 nt11.51□□□□□ -0.57
BDF2Q07442 YBR232CYBR232C 360 nt11.49□□□□□ -0.57
BDF2Q07442 HXT12YIL170W 1374 nt11.48□□□□□ -0.57
BDF2Q07442 PRY1YJL079C 900 nt11.45□□□□□ -0.58
BDF2Q07442 VRG4YGL225W 1014 nt11.44□□□□□ -0.58
BDF2Q07442 STP3YLR375W 1032 nt11.44□□□□□ -0.58
BDF2Q07442 ALD4YOR374W 1560 nt11.44□□□□□ -0.58
BDF2Q07442 YJL064WYJL064W 396 nt11.43□□□□□ -0.58
BDF2Q07442 UTR1YJR049C 1593 nt11.41□□□□□ -0.58
BDF2Q07442 UGA4YDL210W 1716 nt11.38□□□□□ -0.59
BDF2Q07442 PAU19YMR325W 375 nt11.38□□□□□ -0.59
BDF2Q07442 FUR4YBR021W 1902 nt11.37□□□□□ -0.59
BDF2Q07442 YJL055WYJL055W 738 nt11.36□□□□□ -0.59
BDF2Q07442 CCT5YJR064W 1689 nt11.36□□□□□ -0.59
BDF2Q07442 TIM44YIL022W 1296 nt11.34□□□□□ -0.59
BDF2Q07442 RDN37-1RDN37-1 5354 nt11.32□□□□□ -0.6
BDF2Q07442 RDN37-2RDN37-2 5354 nt11.32□□□□□ -0.6
BDF2Q07442 SED1YDR077W 1017 nt11.32□□□□□ -0.6
BDF2Q07442 YJR114WYJR114W 393 nt11.32□□□□□ -0.6
BDF2Q07442 HSP60YLR259C 1719 nt11.32□□□□□ -0.6
BDF2Q07442 YER190C-AYER190C-A 576 nt11.31□□□□□ -0.6
BDF2Q07442 YGR296C-AYGR296C-A 576 nt11.31□□□□□ -0.6
BDF2Q07442 YML133W-AYML133W-A 576 nt11.31□□□□□ -0.6
BDF2Q07442 YNL339W-AYNL339W-A 576 nt11.31□□□□□ -0.6
BDF2Q07442 SLG1YOR008C 1137 nt11.31□□□□□ -0.6
BDF2Q07442 YPL283W-AYPL283W-A 576 nt11.31□□□□□ -0.6
BDF2Q07442 FRE6YLL051C 2139 nt11.27□□□□□ -0.6
BDF2Q07442 SAM35YHR083W 990 nt11.25□□□□□ -0.61
BDF2Q07442 TAF13YML098W 504 nt11.25□□□□□ -0.61
BDF2Q07442 YGR259CYGR259C 441 nt11.24□□□□□ -0.61
BDF2Q07442 MCH5YOR306C 1566 nt11.24□□□□□ -0.61
BDF2Q07442 ALG12YNR030W 1656 nt11.24□□□□□ -0.61
BDF2Q07442 THI72YOR192C 1800 nt11.23□□□□□ -0.61
BDF2Q07442 LIP1YMR298W 453 nt11.21□□□□□ -0.61
BDF2Q07442 YKR005CYKR005C 1578 nt11.2□□□□□ -0.62
BDF2Q07442 CSM1YCR086W 573 nt11.2□□□□□ -0.62
BDF2Q07442 RIB1YBL033C 1038 nt11.19□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms