Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 TOM71YHR117W 1920 nt6.73□□□□□ -1.33
SHH4Q06236 DMA2YNL116W 1569 nt6.73□□□□□ -1.33
SHH4Q06236 ERV46YAL042W 1248 nt6.72□□□□□ -1.33
SHH4Q06236 DUT1YBR252W 444 nt6.72□□□□□ -1.33
SHH4Q06236 YOR139CYOR139C 393 nt6.7□□□□□ -1.34
SHH4Q06236 VPS60YDR486C 690 nt6.69□□□□□ -1.34
SHH4Q06236 PUS2YGL063W 1113 nt6.69□□□□□ -1.34
SHH4Q06236 PRM5YIL117C 957 nt6.69□□□□□ -1.34
SHH4Q06236 GOR1YNL274C 1053 nt6.69□□□□□ -1.34
SHH4Q06236 RTG2YGL252C 1767 nt6.68□□□□□ -1.34
SHH4Q06236 RBG1YAL036C 1110 nt6.68□□□□□ -1.34
SHH4Q06236 TAD3YLR316C 969 nt6.67□□□□□ -1.34
SHH4Q06236 YOR325WYOR325W 474 nt6.67□□□□□ -1.34
SHH4Q06236 YPR011CYPR011C 981 nt6.67□□□□□ -1.34
SHH4Q06236 PUS7YOR243C 2031 nt6.67□□□□□ -1.34
SHH4Q06236 TPN1YGL186C 1740 nt6.67□□□□□ -1.34
SHH4Q06236 CCT4YDL143W 1587 nt6.66□□□□□ -1.34
SHH4Q06236 YJL067WYJL067W 351 nt6.66□□□□□ -1.34
SHH4Q06236 AVT6YER119C 1347 nt6.66□□□□□ -1.34
SHH4Q06236 ALG3YBL082C 1377 nt6.66□□□□□ -1.34
SHH4Q06236 GAP1YKR039W 1809 nt6.65□□□□□ -1.34
SHH4Q06236 YIL100C-AYIL100C-A 339 nt6.65□□□□□ -1.34
SHH4Q06236 MTO1YGL236C 2010 nt6.65□□□□□ -1.35
SHH4Q06236 SNU66YOR308C 1764 nt6.64□□□□□ -1.35
SHH4Q06236 MEX67YPL169C 1800 nt6.64□□□□□ -1.35
SHH4Q06236 RSC8YFR037C 1674 nt6.63□□□□□ -1.35
SHH4Q06236 YLR179CYLR179C 606 nt6.63□□□□□ -1.35
SHH4Q06236 SWC5YBR231C 912 nt6.63□□□□□ -1.35
SHH4Q06236 KES1YPL145C 1305 nt6.62□□□□□ -1.35
SHH4Q06236 TIM23YNR017W 669 nt6.62□□□□□ -1.35
SHH4Q06236 ADE2YOR128C 1716 nt6.62□□□□□ -1.35
SHH4Q06236 ARO8YGL202W 1503 nt6.61□□□□□ -1.35
SHH4Q06236 MDL2YPL270W 2322 nt6.6□□□□□ -1.35
SHH4Q06236 BET2YPR176C 978 nt6.6□□□□□ -1.35
SHH4Q06236 SGA1YIL099W 1650 nt6.6□□□□□ -1.35
SHH4Q06236 OPI10YOL032W 741 nt6.59□□□□□ -1.35
SHH4Q06236 PLB1YMR008C 1995 nt6.58□□□□□ -1.36
SHH4Q06236 YHR218WYHR218W 1812 nt6.58□□□□□ -1.36
SHH4Q06236 YLR235CYLR235C 399 nt6.57□□□□□ -1.36
SHH4Q06236 SFL1YOR140W 2301 nt6.57□□□□□ -1.36
SHH4Q06236 THI6YPL214C 1623 nt6.57□□□□□ -1.36
SHH4Q06236 SAM35YHR083W 990 nt6.56□□□□□ -1.36
SHH4Q06236 AHT1YHR093W 549 nt6.56□□□□□ -1.36
SHH4Q06236 PTH1YHR189W 573 nt6.55□□□□□ -1.36
SHH4Q06236 LSB5YCL034W 1065 nt6.55□□□□□ -1.36
SHH4Q06236 ARP6YLR085C 1317 nt6.53□□□□□ -1.36
SHH4Q06236 GCD11YER025W 1584 nt6.52□□□□□ -1.36
SHH4Q06236 CCT2YIL142W 1584 nt6.52□□□□□ -1.36
SHH4Q06236 UFD1YGR048W 1086 nt6.52□□□□□ -1.37
SHH4Q06236 YMR244WYMR244W 1068 nt6.52□□□□□ -1.37
SHH4Q06236 tM(CAU)CtM(CAU)C 72 nt6.5□□□□□ -1.37
SHH4Q06236 IMT4tM(CAU)E 72 nt6.5□□□□□ -1.37
SHH4Q06236 IMT3tM(CAU)J3 72 nt6.5□□□□□ -1.37
SHH4Q06236 IMT1tM(CAU)O1 72 nt6.5□□□□□ -1.37
SHH4Q06236 IMT2tM(CAU)P 72 nt6.5□□□□□ -1.37
SHH4Q06236 MAM3YOL060C 2121 nt6.49□□□□□ -1.37
SHH4Q06236 CWC15YDR163W 528 nt6.49□□□□□ -1.37
SHH4Q06236 ODC1YPL134C 933 nt6.49□□□□□ -1.37
SHH4Q06236 YPR064WYPR064W 420 nt6.49□□□□□ -1.37
SHH4Q06236 LPD1YFL018C 1500 nt6.49□□□□□ -1.37
SHH4Q06236 HXT10YFL011W 1641 nt6.47□□□□□ -1.37
SHH4Q06236 NBP35YGL091C 987 nt6.47□□□□□ -1.37
SHH4Q06236 DAT1YML113W 747 nt6.47□□□□□ -1.37
SHH4Q06236 YRF1-2YER190W 5046 nt6.46□□□□□ -1.38
SHH4Q06236 UTR1YJR049C 1593 nt6.46□□□□□ -1.38
SHH4Q06236 SHM2YLR058C 1410 nt6.46□□□□□ -1.38
SHH4Q06236 DUR3YHL016C 2208 nt6.46□□□□□ -1.38
SHH4Q06236 DAK2YFL053W 1776 nt6.44□□□□□ -1.38
SHH4Q06236 YCR102CYCR102C 1107 nt6.44□□□□□ -1.38
SHH4Q06236 NBA1YOL070C 1506 nt6.44□□□□□ -1.38
SHH4Q06236 YEL023CYEL023C 2049 nt6.42□□□□□ -1.38
SHH4Q06236 ALR1YOL130W 2580 nt6.41□□□□□ -1.38
SHH4Q06236 FIT1YDR534C 1587 nt6.41□□□□□ -1.38
SHH4Q06236 TIM17YJL143W 477 nt6.41□□□□□ -1.38
SHH4Q06236 MDM35YKL053C-A 261 nt6.41□□□□□ -1.38
SHH4Q06236 SBA1YKL117W 651 nt6.41□□□□□ -1.38
SHH4Q06236 PHO23YNL097C 993 nt6.41□□□□□ -1.38
SHH4Q06236 MIM1YOL026C 342 nt6.41□□□□□ -1.38
SHH4Q06236 YRF1-3YGR296W 5580 nt6.41□□□□□ -1.38
SHH4Q06236 YRF1-6YNL339C 5580 nt6.41□□□□□ -1.38
SHH4Q06236 YRF1-7YPL283C 5580 nt6.41□□□□□ -1.38
SHH4Q06236 ZAP1YJL056C 2643 nt6.4□□□□□ -1.38
SHH4Q06236 YKL030WYKL030W 606 nt6.4□□□□□ -1.38
SHH4Q06236 YJL045WYJL045W 1905 nt6.4□□□□□ -1.39
SHH4Q06236 QDR2YIL121W 1629 nt6.39□□□□□ -1.39
SHH4Q06236 LSR1LSR1 1175 nt6.39□□□□□ -1.39
SHH4Q06236 LSB6YJL100W 1824 nt6.39□□□□□ -1.39
SHH4Q06236 MRP20YDR405W 792 nt6.38□□□□□ -1.39
SHH4Q06236 SHB17YKR043C 816 nt6.38□□□□□ -1.39
SHH4Q06236 HXT1YHR094C 1713 nt6.38□□□□□ -1.39
SHH4Q06236 STF1YDL130W-A 261 nt6.37□□□□□ -1.39
SHH4Q06236 NIT1YIL164C 600 nt6.37□□□□□ -1.39
SHH4Q06236 YLR415CYLR415C 339 nt6.37□□□□□ -1.39
SHH4Q06236 SSL2YIL143C 2532 nt6.36□□□□□ -1.39
SHH4Q06236 ECM10YEL030W 1935 nt6.35□□□□□ -1.39
SHH4Q06236 tD(GUC)BtD(GUC)B 72 nt6.35□□□□□ -1.39
SHH4Q06236 tD(GUC)DtD(GUC)D 72 nt6.35□□□□□ -1.39
SHH4Q06236 tD(GUC)G1tD(GUC)G1 72 nt6.35□□□□□ -1.39
SHH4Q06236 tD(GUC)G2tD(GUC)G2 72 nt6.35□□□□□ -1.39
SHH4Q06236 tD(GUC)I1tD(GUC)I1 72 nt6.35□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms